|
|
ZNF524_d1 |
|
|
|
|||
|
|
A |
C |
G |
T |
|
Name |
ZNF524 |
|
1 |
2350 |
155 |
111 |
132 |
|
TF group |
C2H2 |
|
2 |
83 |
2027 |
58 |
61 |
|
Polypeptide used |
full |
|
3 |
109 |
2051 |
65 |
82 |
|
Ligand sequence |
TCTATG40NTAG |
|
4 |
26 |
2039 |
78 |
41 |
|
Batch of SELEX experiment |
AI |
|
5 |
45 |
48 |
17 |
2731 |
|
Seed sequence |
ACCCTTGAACCC |
|
6 |
87 |
2356 |
102 |
1241 |
|
Hamming distance of sequences to seed |
2 |
|
7 |
160 |
25 |
2764 |
27 |
|
SELEX cycle |
5 |
|
8 |
2203 |
303 |
473 |
243 |
|
Number of repeats |
dimeric |
|
9 |
2371 |
6 |
5 |
6 |
|
Comment |
|
|
10 |
2 |
2075 |
3 |
11 |
|
Representative matrix |
yes |
|
11 |
18 |
2074 |
6 |
7 |
|
Source: |
|
|
12 |
32 |
2065 |
25 |
25 |
|
Jolma et al., Cell 152:327-339 (2013); PubMed 23332764 |
|
|
|
|
|
|
|
|
|
|
|
|
ZNF524_m1 |
|
|
|
|||
|
|
A |
C |
G |
T |
|
Name |
ZNF524 |
|
1 |
101 |
774 |
174 |
124 |
|
TF group |
C2H2 |
|
2 |
10 |
19 |
4 |
1050 |
|
Polypeptide used |
full |
|
3 |
13 |
823 |
16 |
132 |
|
Ligand sequence |
TCTATG40NTAG |
|
4 |
38 |
5 |
1044 |
3 |
|
Batch of SELEX experiment |
AI |
|
5 |
639 |
93 |
300 |
113 |
|
Seed sequence |
CTCGRACCCGTGCN |
|
6 |
963 |
3 |
2 |
8 |
|
Hamming distance of sequences to seed |
2 |
|
7 |
0 |
865 |
0 |
0 |
|
SELEX cycle |
5 |
|
8 |
1 |
866 |
0 |
0 |
|
Number of repeats |
monomeric |
|
9 |
0 |
863 |
0 |
5 |
|
Comment |
|
|
10 |
148 |
139 |
946 |
888 |
|
Representative
matrix |
yes |
|
11 |
273 |
269 |
330 |
894 |
|
|
|
|
12 |
388 |
145 |
895 |
145 |
|
Source: |
|
|
13 |
483 |
725 |
259 |
391 |
|
Jolma et al., Cell 152:327-339 (2013); PubMed 23332764 |
|
|
14 |
220 |
448 |
130 |
103 |
|
|
|