|
|
ZNF410 |
|
|
|
|||
|
|
A |
C |
G |
T |
|
Name |
ZNF410 |
|
1 |
661 |
700 |
950 |
1677 |
|
TF group |
C2H2 |
|
2 |
1715 |
1872 |
399 |
2 |
|
Polypeptide used |
DBD |
|
3 |
1 |
3641 |
0 |
370 |
|
Ligand sequence |
TGCACT20NGA |
|
4 |
3985 |
2 |
1 |
4 |
|
Batch of SELEX experiment |
AC |
|
5 |
50 |
33 |
124 |
3827 |
|
Seed sequence |
NNCATCCCATAATANTC |
|
6 |
69 |
3949 |
1 |
4 |
|
Hamming distance of sequences to seed |
3 |
|
7 |
12 |
3986 |
0 |
0 |
|
SELEX cycle |
3 |
|
8 |
0 |
3986 |
1 |
0 |
|
Number of repeats |
monomeric |
|
9 |
3985 |
5 |
1 |
2 |
|
Comment |
|
|
10 |
0 |
9 |
0 |
3987 |
|
Representative
matrix |
yes |
|
11 |
3987 |
8 |
0 |
0 |
|
|
|
|
12 |
3983 |
2 |
3 |
1 |
|
|
|
|
13 |
4 |
6 |
0 |
3984 |
|
|
|
|
14 |
3930 |
17 |
43 |
24 |
|
|
|
|
15 |
1069 |
1285 |
619 |
1015 |
|
Source: |
|
|
16 |
172 |
818 |
788 |
2274 |
|
Jolma et al., Cell 152:327-339 (2013); PubMed 23332764 |
|
|
17 |
798 |
2628 |
93 |
520 |
|
|
|