|
|
ZNF143 |
|
|
|
|||
|
|
A |
C |
G |
T |
|
Name |
ZNF143 |
|
1 |
87 |
509 |
153 |
1285 |
|
TF group |
C2H2 |
|
2 |
949 |
0 |
13 |
652 |
|
Polypeptide used |
DBD |
|
3 |
21 |
1590 |
1 |
1 |
|
Ligand sequence |
TGCAAG20NCG |
|
4 |
2 |
1609 |
0 |
0 |
|
Batch of SELEX experiment |
V |
|
5 |
0 |
1609 |
0 |
0 |
|
Seed sequence |
TWCCCAYAATGCATTG |
|
6 |
1609 |
0 |
4 |
3 |
|
Hamming distance of sequences to seed |
3 |
|
7 |
0 |
917 |
61 |
686 |
|
SELEX cycle |
4 |
|
8 |
1295 |
143 |
310 |
0 |
|
Number of repeats |
monomeric |
|
9 |
1572 |
0 |
67 |
1 |
|
Comment |
|
|
10 |
6 |
0 |
1 |
1609 |
|
Representative
matrix |
yes |
|
11 |
59 |
36 |
1553 |
9 |
|
|
|
|
12 |
0 |
1609 |
0 |
0 |
|
|
|
|
13 |
1503 |
153 |
3 |
27 |
|
|
|
|
14 |
345 |
1067 |
15 |
1080 |
|
Source: |
|
|
15 |
102 |
1138 |
13 |
1199 |
|
Jolma et al., Cell 152:327-339 (2013); PubMed 23332764 |
|
|
16 |
382 |
21 |
1518 |
120 |
|
|
|