|
|
ZIC1 |
|
|
|
|||
|
|
A |
C |
G |
T |
|
Name |
ZIC1 |
|
1 |
1113 |
3934 |
25702 |
8960 |
|
TF group |
C2H2 |
|
2 |
22722 |
2660 |
7408 |
23 |
|
Polypeptide used |
full |
|
3 |
836 |
28949 |
58 |
125 |
|
Ligand sequence |
TCGACT20NCAT |
|
4 |
1264 |
29217 |
204 |
281 |
|
Batch of SELEX experiment |
AF |
|
5 |
2606 |
25527 |
327 |
927 |
|
Seed sequence |
GACCMCCYRMTGNG |
|
6 |
0 |
29399 |
4 |
7 |
|
Hamming distance of sequences to seed |
2 |
|
7 |
185 |
29532 |
10 |
14 |
|
SELEX cycle |
4 |
|
8 |
22 |
18412 |
0 |
10313 |
|
Number of repeats |
monomeric |
|
9 |
2156 |
45 |
31995 |
14 |
|
Comment |
|
|
10 |
23 |
27426 |
439 |
6735 |
|
Representative
matrix |
yes |
|
11 |
1215 |
1757 |
5531 |
27084 |
|
|
|
|
12 |
73 |
24 |
34649 |
1 |
|
Source: |
|
|
13 |
3121 |
7693 |
1690 |
16190 |
|
Jolma et al., Cell 152:327-339 (2013); PubMed 23332764 |
|
|
14 |
35 |
520 |
34431 |
2725 |
|
|
|