VSX2

 

 

 

 

A

C

G

T

 

Name

VSX2

1

427

9554

445

4255

 

TF group

homeodomain

2

1080

2725

363

13809

 

Polypeptide used

DBD

3

13809

397

343

402

 

Ligand sequence

TCTCCC20NCCG

4

13809

124

123

63

 

Batch of SELEX experiment

Z

5

118

186

92

13809

 

Seed sequence

YTAATTAN

6

626

567

447

13809

 

Hamming distance of sequences to seed

1

7

13809

321

2109

1014

 

SELEX cycle

2

8

2891

3243

4288

3387

 

Number of repeats

monomeric

 

 

 

 

 

 

Comment

 

 

 

 

 

 

 

Representative matrix

no

 

 

 

 

 

 

 

 

 

 

 

 

 

 

Source:

 

 

 

 

 

 

 

Jolma et al., Cell 152:327-339 (2013); PubMed 23332764