|
|
Tp73 |
|
|
|
|||
|
|
A |
C |
G |
T |
|
Name |
Tp73 |
|
1 |
3617 |
313 |
3891 |
3689 |
|
TF group |
p53l |
|
2 |
6206 |
429 |
3304 |
208 |
|
Polypeptide used |
DBD |
|
3 |
0 |
10829 |
0 |
0 |
|
Ligand sequence |
TACCGT40NGCC |
|
4 |
8760 |
124 |
557 |
198 |
|
Batch of SELEX experiment |
AK |
|
5 |
3837 |
293 |
806 |
11480 |
|
Seed sequence |
NRCATGYYNNRRCAYGYN |
|
6 |
8 |
28 |
11787 |
1 |
|
Hamming distance of sequences to seed |
2 |
|
7 |
130 |
2591 |
91 |
11892 |
|
SELEX cycle |
4 |
|
8 |
1377 |
8161 |
783 |
2749 |
|
Number of repeats |
dimeric |
|
9 |
2166 |
2940 |
2230 |
4242 |
|
Comment |
|
|
10 |
3488 |
2418 |
3558 |
2457 |
|
Representative
matrix |
no |
|
11 |
3988 |
441 |
7797 |
1002 |
|
|
|
|
12 |
9639 |
145 |
1414 |
442 |
|
|
|
|
13 |
0 |
11703 |
0 |
0 |
|
|
|
|
14 |
10125 |
143 |
279 |
2302 |
|
|
|
|
15 |
256 |
5965 |
130 |
8476 |
|
|
|
|
16 |
16 |
170 |
13026 |
39 |
|
Source: |
|
|
17 |
993 |
6944 |
181 |
6995 |
|
Jolma et
al., Cell 152:327-339 (2013); PubMed 23332764 |
|
|
18 |
4008 |
5125 |
519 |
2232 |
|
|
|