|
|
TBX2_d1 |
|
|
|
|||
|
|
A |
C |
G |
T |
|
Name |
TBX2 |
|
1 |
453 |
416 |
2403 |
246 |
|
TF group |
TBX |
|
2 |
7 |
17 |
2964 |
35 |
|
Polypeptide used |
full |
|
3 |
7 |
410 |
16 |
2211 |
|
Ligand sequence |
TCTATG20NTAG |
|
4 |
1 |
1 |
2971 |
4 |
|
Batch of SELEX experiment |
AF |
|
5 |
262 |
375 |
114 |
2043 |
|
Seed sequence |
GGTGTNANWWNTNACACC |
|
6 |
114 |
372 |
1455 |
572 |
|
Hamming distance of sequences to seed |
2 |
|
7 |
1507 |
40 |
253 |
44 |
|
SELEX cycle |
4 |
|
8 |
919 |
229 |
463 |
357 |
|
Number of repeats |
dimeric |
|
9 |
1141 |
174 |
307 |
450 |
|
Comment |
|
|
10 |
832 |
212 |
276 |
978 |
|
Representative matrix |
no |
|
11 |
433 |
347 |
528 |
884 |
|
|
|
|
12 |
98 |
323 |
69 |
2201 |
|
|
|
|
13 |
436 |
931 |
732 |
77 |
|
|
|
|
14 |
1445 |
31 |
268 |
262 |
|
|
|
|
15 |
0 |
2146 |
0 |
4 |
|
|
|
|
16 |
1497 |
7 |
144 |
4 |
|
Source: |
|
|
17 |
0 |
2038 |
50 |
12 |
|
Jolma et al., Cell 152:327-339 (2013); PubMed 23332764 |
|
|
18 |
236 |
1648 |
501 |
623 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
TBX2_m1 |
|
|
|
|||
|
|
A |
C |
G |
T |
|
Name |
TBX2 |
|
1 |
1258 |
402 |
717 |
804 |
|
TF group |
TBX |
|
2 |
3181 |
59 |
716 |
442 |
|
Polypeptide used |
full |
|
3 |
602 |
519 |
3181 |
353 |
|
Ligand sequence |
TCTATG20NTAG |
|
4 |
9 |
36 |
3181 |
14 |
|
Batch of SELEX experiment |
AF |
|
5 |
0 |
329 |
21 |
3181 |
|
Seed sequence |
NAGGTGTGAWN |
|
6 |
26 |
0 |
3181 |
12 |
|
Hamming distance of sequences to seed |
1 |
|
7 |
307 |
392 |
27 |
3181 |
|
SELEX cycle |
4 |
|
8 |
310 |
1289 |
3181 |
1409 |
|
Number of repeats |
monomeric |
|
9 |
3181 |
26 |
125 |
120 |
|
Comment |
|
|
10 |
2525 |
491 |
527 |
656 |
|
Representative
matrix |
no |
|
11 |
1477 |
446 |
590 |
667 |
|
|
|
|
|
|
|
|
|
|
Source: |
|
|
|
|
|
|
|
|
Jolma et
al., Cell 152:327-339 (2013); PubMed 23332764 |
|