|
|
TBX19 |
|
|
|
|||
|
|
A |
C |
G |
T |
|
Name |
TBX19 |
|
1 |
10247 |
5394 |
7955 |
15259 |
|
TF group |
TBX |
|
2 |
7363 |
4213 |
7813 |
21130 |
|
Polypeptide used |
DBD |
|
3 |
343 |
1043 |
221 |
44289 |
|
Ligand sequence |
TACTAT40NATC |
|
4 |
13892 |
24809 |
9198 |
2402 |
|
Batch of SELEX experiment |
AI |
|
5 |
23300 |
456 |
12031 |
1889 |
|
Seed sequence |
NNTCRCACNTANGTGYGANN |
|
6 |
76 |
31489 |
96 |
228 |
|
Hamming distance of sequences to seed |
2 |
|
7 |
31154 |
50 |
1899 |
27 |
|
SELEX cycle |
3 |
|
8 |
2675 |
29630 |
1507 |
5303 |
|
Number of repeats |
dimeric |
|
9 |
7973 |
15621 |
7432 |
4383 |
|
Comment |
|
|
10 |
5455 |
4319 |
2831 |
40120 |
|
Representative matrix |
yes |
|
11 |
29962 |
1692 |
4295 |
4116 |
|
|
|
|
12 |
5373 |
7005 |
19801 |
8983 |
|
|
|
|
13 |
8127 |
1730 |
43953 |
3921 |
|
|
|
|
14 |
82 |
2983 |
265 |
43499 |
|
|
|
|
15 |
278 |
20 |
48757 |
128 |
|
|
|
|
16 |
2765 |
12022 |
694 |
26200 |
|
|
|
|
17 |
2535 |
6135 |
39866 |
13125 |
|
|
|
|
18 |
31606 |
111 |
858 |
235 |
|
Source: |
|
|
19 |
19937 |
4953 |
4529 |
5442 |
|
Jolma et al., Cell 152:327-339 (2013); PubMed 23332764 |
|
|
20 |
16038 |
5961 |
5924 |
8228 |
|
|
|