|
|
SPIB |
|
|
|
|||
|
|
A |
C |
G |
T |
|
Name |
SPIB |
|
1 |
24854 |
7868 |
12714 |
7087 |
|
TF group |
ETS |
|
2 |
30979 |
1279 |
7408 |
2726 |
|
Polypeptide used |
DBD |
|
3 |
33157 |
274 |
761 |
1298 |
|
Ligand sequence |
TGTCTA20NTCG |
|
4 |
32901 |
131 |
188 |
1948 |
|
Batch of SELEX experiment |
AK |
|
5 |
30928 |
423 |
765 |
9098 |
|
Seed sequence |
AAAAAGMGGAAGTN |
|
6 |
2494 |
5460 |
51653 |
500 |
|
Hamming distance of sequences to seed |
2 |
|
7 |
16144 |
24784 |
5671 |
124 |
|
SELEX cycle |
2 |
|
8 |
930 |
19 |
54436 |
14 |
|
Number of repeats |
monomeric |
|
9 |
0 |
15 |
55102 |
35 |
|
Comment |
|
|
10 |
34439 |
28 |
65 |
69 |
|
Representative
matrix |
no |
|
11 |
34776 |
37 |
65 |
139 |
|
|
|
|
12 |
727 |
5834 |
53181 |
166 |
|
Source: |
|
|
13 |
901 |
2313 |
716 |
49234 |
|
Jolma et al., Cell 152:327-339 (2013); PubMed 23332764 |
|
|
14 |
17588 |
3836 |
11073 |
10612 |
|
|
|