|
|
SP4 |
|
|
|
|||
|
|
A |
C |
G |
T |
|
Name |
SP4 |
|
1 |
621 |
1405 |
823 |
1622 |
|
TF group |
C2H2 |
|
2 |
2173 |
156 |
65 |
1809 |
|
Polypeptide used |
full |
|
3 |
2600 |
146 |
1639 |
199 |
|
Ligand sequence |
TTATGT20NGTA |
|
4 |
939 |
6 |
4774 |
16 |
|
Batch of SELEX experiment |
AE |
|
5 |
260 |
4443 |
0 |
4 |
|
Seed sequence |
NWRGCCMCGCCCMCTNN |
|
6 |
2 |
4492 |
5 |
135 |
|
Hamming distance of sequences to seed |
2 |
|
7 |
3004 |
991 |
3 |
0 |
|
SELEX cycle |
4 |
|
8 |
2 |
4662 |
0 |
0 |
|
Number of repeats |
monomeric |
|
9 |
10 |
14 |
5444 |
55 |
|
Comment |
|
|
10 |
2 |
4681 |
4 |
0 |
|
Representative
matrix |
no |
|
11 |
3 |
4732 |
2 |
0 |
|
|
|
|
12 |
0 |
4667 |
3 |
72 |
|
|
|
|
13 |
1840 |
2430 |
9 |
67 |
|
|
|
|
14 |
113 |
4276 |
21 |
1067 |
|
Source: |
|
|
15 |
1140 |
897 |
234 |
3043 |
|
Jolma et al., Cell 152:327-339 (2013); PubMed 23332764 |
|
|
16 |
582 |
1206 |
363 |
2078 |
|
|
|
|
17 |
967 |
1180 |
556 |
1509 |
|
|
|