|
SP3 |
|
|
|
|||
|
A |
C |
G |
T |
|
Name |
SP3 |
1 |
4161 |
5583 |
6609 |
2223 |
|
TF group |
C2H2 |
2 |
1642 |
6609 |
394 |
666 |
|
Polypeptide used |
DBD |
3 |
674 |
6609 |
250 |
346 |
|
Ligand sequence |
TCGGCC20NGA |
4 |
4959 |
1649 |
185 |
125 |
|
Batch of SELEX experiment |
O |
5 |
160 |
6609 |
85 |
227 |
|
Seed sequence |
GCCMCGCCCMC |
6 |
3108 |
463 |
6609 |
1720 |
|
Hamming distance of sequences to seed |
1 |
7 |
142 |
6609 |
38 |
81 |
|
SELEX cycle |
6 |
8 |
179 |
6609 |
53 |
59 |
|
Number of repeats |
monomeric |
9 |
78 |
6609 |
123 |
1340 |
|
Comment |
|
10 |
3229 |
3380 |
175 |
665 |
|
Representative
matrix |
no |
11 |
1508 |
6609 |
1070 |
2636 |
|
Source: |
|
|
|
|
|
|
|
Jolma et al., Cell 152:327-339 (2013); PubMed 23332764 |