|
SP1 |
|
|
|
|||
|
A |
C |
G |
T |
|
Name |
SP1 |
1 |
3499 |
169 |
3265 |
624 |
|
TF group |
C2H2 |
2 |
891 |
3265 |
156 |
306 |
|
Polypeptide used |
DBD |
3 |
287 |
3265 |
81 |
696 |
|
Ligand sequence |
TCTATG20NGA |
4 |
1622 |
1643 |
171 |
8 |
|
Batch of SELEX experiment |
O |
5 |
20 |
3265 |
6 |
6 |
|
Seed sequence |
GCCMCGCCCMC |
6 |
2011 |
58 |
3265 |
1353 |
|
Hamming distance of sequences to seed |
1 |
7 |
0 |
3265 |
1 |
10 |
|
SELEX cycle |
4 |
8 |
6 |
3265 |
2 |
5 |
|
Number of repeats |
monomeric |
9 |
5 |
3265 |
0 |
665 |
|
Comment |
|
10 |
1470 |
1795 |
59 |
448 |
|
Representative
matrix |
no |
11 |
1116 |
3265 |
660 |
1272 |
|
Source: |
|
|
|
|
|
|
|
Jolma et al., Cell 152:327-339 (2013); PubMed 23332764 |