|
|
SOX4 |
|
|
|
|||
|
|
A |
C |
G |
T |
|
Name |
SOX4 |
|
1 |
138 |
69 |
258 |
81 |
|
TF group |
HMG |
|
2 |
547 |
0 |
0 |
0 |
|
Polypeptide used |
DBD |
|
3 |
547 |
0 |
5 |
0 |
|
Ligand sequence |
TATCGC30NGCG |
|
4 |
0 |
547 |
0 |
0 |
|
Batch of SELEX experiment |
AH |
|
5 |
547 |
0 |
1 |
0 |
|
Seed sequence |
NAACAATTKCAGTGTT |
|
6 |
547 |
0 |
3 |
1 |
|
Hamming distance of sequences to seed |
1 |
|
7 |
0 |
0 |
1 |
547 |
|
SELEX cycle |
4 |
|
8 |
0 |
0 |
11 |
547 |
|
Number of repeats |
dimeric |
|
9 |
54 |
39 |
398 |
149 |
|
Comment |
possible binding to single stranded DNA |
|
10 |
0 |
547 |
0 |
0 |
|
Representative
matrix |
no |
|
11 |
547 |
0 |
1 |
0 |
|
|
|
|
12 |
0 |
0 |
547 |
25 |
|
|
|
|
13 |
0 |
0 |
4 |
547 |
|
|
|
|
14 |
1 |
0 |
547 |
0 |
|
Source: |
|
|
15 |
0 |
1 |
0 |
547 |
|
Jolma et al., Cell 152:327-339 (2013); PubMed 23332764 |
|
|
16 |
2 |
1 |
1 |
547 |
|
|
|