|
SHOX2_1 |
|
|
|
|||
|
A |
C |
G |
T |
|
Name |
SHOX2 |
1 |
921 |
2536 |
1142 |
1652 |
|
TF group |
homeodomain |
2 |
407 |
3209 |
143 |
3041 |
|
Polypeptide used |
DBD |
3 |
6251 |
318 |
104 |
323 |
|
Ligand sequence |
TACGTC20NTGC |
4 |
6251 |
87 |
29 |
30 |
|
Batch of SELEX experiment |
Y |
5 |
67 |
11 |
5 |
6251 |
|
Seed sequence |
NYAATTAN |
6 |
255 |
109 |
225 |
6251 |
|
Hamming distance of sequences to seed |
1 |
7 |
6251 |
131 |
17 |
415 |
|
SELEX cycle |
2 |
8 |
2323 |
903 |
2277 |
749 |
|
Number of repeats |
monomeric |
|
|
|
|
|
|
Comment |
|
|
|
|
|
|
|
Representative matrix |
no |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Source: |
|
|
|
|
|
|
|
Jolma et al., Cell 152:327-339 (2013); PubMed 23332764 |
|
|
|
|
|
|
|
|
|
|
Shox2_2 |
|
|
|
|||
|
A |
C |
G |
T |
|
Name |
Shox2 |
1 |
2390 |
7695 |
3292 |
4802 |
|
TF group |
homeodomain |
2 |
979 |
9027 |
228 |
9152 |
|
Polypeptide used |
DBD |
3 |
18179 |
626 |
426 |
766 |
|
Ligand sequence |
TCCCAG20NACC |
4 |
18179 |
138 |
3 |
79 |
|
Batch of SELEX experiment |
Z |
5 |
29 |
12 |
0 |
18179 |
|
Seed sequence |
NYAATTAN |
6 |
597 |
545 |
870 |
18179 |
|
Hamming distance of sequences to seed |
1 |
7 |
18179 |
193 |
36 |
895 |
|
SELEX cycle |
2 |
8 |
6542 |
3021 |
6337 |
2278 |
|
Number of repeats |
monomeric |
|
|
|
|
|
|
Comment |
|
|
|
|
|
|
|
Representative
matrix |
no |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Source: |
|
|
|
|
|
|
|
Jolma et
al., Cell 152:327-339 (2013); PubMed 23332764 |