|
|
PRDM4 |
|
|
|
|||
|
|
A |
C |
G |
T |
|
Name |
PRDM4 |
|
1 |
17 |
35 |
9 |
56739 |
|
TF group |
C2H2 |
|
2 |
7 |
34 |
0 |
56762 |
|
Polypeptide used |
full |
|
3 |
22 |
32 |
0 |
56751 |
|
Ligand sequence |
TAGCAG20NCG |
|
4 |
21 |
56624 |
0 |
162 |
|
Batch of SELEX experiment |
AC |
|
5 |
56364 |
67 |
51 |
377 |
|
Seed sequence |
TTTCAAGGCYCCC |
|
6 |
56701 |
83 |
14 |
21 |
|
Hamming distance of sequences to seed |
3 |
|
7 |
1 |
59 |
56716 |
49 |
|
SELEX cycle |
4 |
|
8 |
1314 |
161 |
50810 |
4638 |
|
Number of repeats |
monomeric |
|
9 |
534 |
55292 |
268 |
864 |
|
Comment |
possibly partial; may bind to CAG of barcode |
|
10 |
388 |
47362 |
543 |
8610 |
|
Representative matrix |
yes |
|
11 |
2409 |
54100 |
71 |
252 |
|
|
|
|
12 |
12 |
56775 |
0 |
10 |
|
Source: |
|
|
13 |
8 |
56694 |
0 |
92 |
|
Jolma et al., Cell 152:327-339 (2013); PubMed 23332764 |
|