POU6F2_m1

 

 

 

 

A

C

G

T

 

Name

POU6F2

1

1848

321

582

546

 

TF group

POU

2

714

1181

2116

266

 

Polypeptide used

DBD

3

239

3297

219

257

 

Ligand sequence

TGCTGT20NCG

4

75

64

114

3297

 

Batch of SELEX experiment

V

5

1192

2105

50

81

 

Seed sequence

NSCTMATTAN

6

3297

75

0

21

 

Hamming distance of sequences to seed

1

7

0

4

0

3297

 

SELEX cycle

3

8

0

12

41

3297

 

Number of repeats

monomeric

9

3297

27

22

53

 

Comment

 

10

1268

546

205

1278

 

Representative matrix

yes

 

 

 

 

 

 

 

 

 

 

 

 

 

 

Source:

 

 

 

 

 

 

 

Jolma et al., Cell 152:327-339 (2013); PubMed 23332764

 

 

 

 

 

 

 

 

 

POU6F2_d1

 

 

 

 

A

C

G

T

 

Name

POU6F2

1

389

306

145

571

 

TF group

POU

2

0

1

1

1683

 

Polypeptide used

DBD

3

1025

2

7

82

 

Ligand sequence

TGCTGT20NCG

4

1021

4

3

0

 

Batch of SELEX experiment

V

5

22

22

81

1638

 

Seed sequence

WTAATKAGCTMATTAW

6

18

39

885

790

 

Hamming distance of sequences to seed

2

7

1042

9

3

23

 

SELEX cycle

3

8

27

185

1618

99

 

Number of repeats

dimeric

9

57

933

65

53

 

Comment

 

10

36

10

11

1614

 

Representative matrix

no

11

650

375

15

31

 

 

 

12

1082

23

8

11

 

 

 

13

8

0

0

1550

 

 

 

14

49

1

0

1515

 

Source:

 

15

1090

0

0

5

 

Jolma et al., Cell 152:327-339 (2013); PubMed 23332764

16

613

87

255

396

 

 

 

 

 

 

 

 

 

 

 

 

POU6F2_m2

 

 

 

 

A

C

G

T

 

Name

POU6F2

1

465

1752

3597

203

 

TF group

POU

2

149

5350

127

221

 

Polypeptide used

full

3

98

30

78

5350

 

Ligand sequence

TATCAT20NCG

4

3912

1438

9

0

 

Batch of SELEX experiment

AC

5

5350

26

0

9

 

Seed sequence

SCTMATTANN

6

2

0

0

5350

 

Hamming distance of sequences to seed

1

7

17

12

6

5350

 

SELEX cycle

4

8

5350

28

15

17

 

Number of repeats

monomeric

9

1320

1197

2148

685

 

Comment

 

10

2084

1091

736

1439

 

Representative matrix

no

 

 

 

 

 

 

 

 

 

 

 

 

 

 

Source:

 

 

 

 

 

 

 

Jolma et al., Cell 152:327-339 (2013); PubMed 23332764