|
|
POU5F1P1_1 |
|
|
|
|||
|
|
A |
C |
G |
T |
|
Name |
POU5F1P1 |
|
1 |
1326 |
1778 |
808 |
9519 |
|
TF group |
POU |
|
2 |
9519 |
21 |
67 |
84 |
|
Polypeptide used |
DBD |
|
3 |
171 |
364 |
206 |
9519 |
|
Ligand sequence |
TAGAGT20NGAT |
|
4 |
322 |
94 |
9519 |
1790 |
|
Batch of SELEX experiment |
Y |
|
5 |
398 |
9519 |
1293 |
3828 |
|
Seed sequence |
TATGCWAAT |
|
6 |
6299 |
51 |
65 |
3220 |
|
Hamming distance of sequences to seed |
1 |
|
7 |
9519 |
144 |
856 |
896 |
|
SELEX cycle |
2 |
|
8 |
9519 |
65 |
97 |
203 |
|
Number of repeats |
monomeric |
|
9 |
1559 |
537 |
750 |
9519 |
|
Comment |
|
|
|
|
|
|
|
|
Representative matrix |
no |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Source: |
|
|
|
|
|
|
|
|
Jolma et al., Cell 152:327-339 (2013); PubMed 23332764 |
|
|
|
|
|
|
|
|
|
|
|
|
POU5F1P1_2 |
|
|
|
|||
|
|
A |
C |
G |
T |
|
Name |
POU5F1P1 |
|
1 |
6679 |
932 |
650 |
3289 |
|
TF group |
POU |
|
2 |
2030 |
554 |
366 |
9968 |
|
Polypeptide used |
DBD |
|
3 |
2190 |
325 |
7778 |
529 |
|
Ligand sequence |
TAGAGT20NGAT |
|
4 |
6160 |
3808 |
142 |
213 |
|
Batch of SELEX experiment |
Y |
|
5 |
9968 |
220 |
299 |
859 |
|
Seed sequence |
WTRMATATKYAW |
|
6 |
844 |
148 |
73 |
9968 |
|
Hamming distance of sequences to seed |
1 |
|
7 |
9968 |
39 |
42 |
501 |
|
SELEX cycle |
3 |
|
8 |
1366 |
296 |
212 |
9968 |
|
Number of repeats |
monomeric |
|
9 |
314 |
122 |
5810 |
4159 |
|
Comment |
|
|
10 |
629 |
8068 |
333 |
1901 |
|
Representative
matrix |
no |
|
11 |
9968 |
228 |
336 |
1081 |
|
Source: |
|
|
12 |
5341 |
639 |
889 |
4628 |
|
Jolma et
al., Cell 152:327-339 (2013); PubMed 23332764 |
|