|
|
POU4F3 |
|
|
|
|||
|
|
A |
C |
G |
T |
|
Name |
POU4F3 |
|
1 |
1663 |
635 |
867 |
761 |
|
TF group |
POU |
|
2 |
292 |
321 |
303 |
4134 |
|
Polypeptide used |
DBD |
|
3 |
1067 |
374 |
4723 |
1067 |
|
Ligand sequence |
TACCGT20NGCC |
|
4 |
1868 |
2014 |
24 |
69 |
|
Batch of SELEX experiment |
Y |
|
5 |
3264 |
42 |
36 |
132 |
|
Seed sequence |
NTGMATAATTAATGAN |
|
6 |
96 |
21 |
25 |
4004 |
|
Hamming distance of sequences to seed |
2 |
|
7 |
3041 |
126 |
133 |
1579 |
|
SELEX cycle |
3 |
|
8 |
3106 |
121 |
126 |
658 |
|
Number of repeats |
monomeric |
|
9 |
433 |
101 |
166 |
3805 |
|
Comment |
|
|
10 |
479 |
66 |
194 |
3728 |
|
Representative
matrix |
no |
|
11 |
3100 |
651 |
789 |
868 |
|
|
|
|
12 |
3447 |
19 |
25 |
22 |
|
|
|
|
13 |
212 |
355 |
180 |
3774 |
|
|
|
|
14 |
1008 |
855 |
4058 |
1753 |
|
Source: |
|
|
15 |
3062 |
1366 |
896 |
981 |
|
Jolma et
al., Cell 152:327-339 (2013); PubMed 23332764 |
|
|
16 |
1023 |
836 |
1729 |
693 |
|
|
|