POU3F3_m1

 

 

 

 

A

C

G

T

 

Name

POU3F3

1

576

75

137

290

 

TF group

POU

2

440

41

131

637

 

Polypeptide used

DBD

3

129

57

64

1078

 

Ligand sequence

TCGCAT20NACT

4

1078

11

12

30

 

Batch of SELEX experiment

Y

5

25

33

49

1078

 

Seed sequence

NWTATGCWAATTW

6

22

10

1078

86

 

Hamming distance of sequences to seed

1

7

28

1078

118

343

 

SELEX cycle

4

8

506

4

1

572

 

Number of repeats

monomeric

9

1078

11

77

79

 

Comment

 

10

1078

6

15

14

 

Representative matrix

no

11

53

20

12

1078

 

 

 

12

240

141

237

1078

 

Source:

 

13

536

85

115

542

 

Jolma et al., Cell 152:327-339 (2013); PubMed 23332764

 

 

 

 

 

 

 

 

 

POU3F3_m2

 

 

 

 

A

C

G

T

 

Name

POU3F3

1

680

123

70

446

 

TF group

POU

2

276

128

47

1126

 

Polypeptide used

DBD

3

184

49

1126

106

 

Ligand sequence

TCGCAT20NACT

4

438

688

4

31

 

Batch of SELEX experiment

Y

5

1126

66

28

31

 

Seed sequence

WTGMATAAWTNA

6

19

5

5

1126

 

Hamming distance of sequences to seed

1

7

1126

27

59

216

 

SELEX cycle

4

8

1126

95

39

320

 

Number of repeats

monomeric

9

578

84

43

548

 

Comment

 

10

135

61

156

1126

 

Representative matrix

no

11

313

151

53

608

 

Source:

 

12

1126

143

182

268

 

Jolma et al., Cell 152:327-339 (2013); PubMed 23332764

 

 

 

 

 

 

 

 

 

POU3F3_d1

 

 

 

 

A

C

G

T

 

Name

POU3F3

1

274

28

29

170

 

TF group

POU

2

140

18

22

445

 

Polypeptide used

DBD

3

181

29

263

129

 

Ligand sequence

TCGCAT20NACT

4

297

147

9

30

 

Batch of SELEX experiment

Y

5

445

13

23

220

 

Seed sequence

WTRMATATKYAW

6

64

30

7

445

 

Hamming distance of sequences to seed

1

7

445

20

12

49

 

SELEX cycle

4

8

441

44

27

445

 

Number of repeats

dimeric

9

68

31

206

239

 

Comment

 

10

182

286

62

159

 

Representative matrix

no

11

445

17

40

83

 

Source:

 

12

222

27

52

222

 

Jolma et al., Cell 152:327-339 (2013); PubMed 23332764