|
|
POU2F1_m1 |
|
|
|
|||
|
|
A |
C |
G |
T |
|
Name |
POU2F1 |
|
1 |
5076 |
1938 |
1494 |
2075 |
|
TF group |
POU |
|
2 |
5351 |
1046 |
2142 |
5231 |
|
Polypeptide used |
DBD |
|
3 |
756 |
1347 |
474 |
10582 |
|
Ligand sequence |
TCTTTC20NGA |
|
4 |
10582 |
12 |
29 |
43 |
|
Batch of SELEX experiment |
AC |
|
5 |
153 |
501 |
213 |
10582 |
|
Seed sequence |
NWTATGCWAATN |
|
6 |
186 |
82 |
10582 |
1326 |
|
Hamming distance of sequences to seed |
1 |
|
7 |
300 |
10582 |
1351 |
3375 |
|
SELEX cycle |
2 |
|
8 |
6932 |
33 |
46 |
3651 |
|
Number of repeats |
monomeric |
|
9 |
10582 |
108 |
879 |
787 |
|
Comment |
|
|
10 |
10582 |
37 |
51 |
158 |
|
Representative matrix |
no |
|
11 |
1422 |
457 |
755 |
10582 |
|
Source: |
|
|
12 |
1976 |
1840 |
2504 |
4262 |
|
Jolma et al., Cell 152:327-339 (2013); PubMed 23332764 |
|
|
|
|
|
|
|
|
|
|
|
|
POU2F1_d1 |
|
|
|
|||
|
|
A |
C |
G |
T |
|
Name |
POU2F1 |
|
1 |
816 |
1312 |
330 |
1118 |
|
TF group |
POU |
|
2 |
2511 |
696 |
191 |
1066 |
|
Polypeptide used |
DBD |
|
3 |
544 |
218 |
70 |
3577 |
|
Ligand sequence |
TCTTTC20NGA |
|
4 |
1064 |
199 |
2512 |
323 |
|
Batch of SELEX experiment |
AC |
|
5 |
1870 |
1707 |
35 |
86 |
|
Seed sequence |
NWTRMATATKYAWN |
|
6 |
3577 |
196 |
110 |
512 |
|
Hamming distance of sequences to seed |
1 |
|
7 |
305 |
98 |
21 |
3577 |
|
SELEX cycle |
2 |
|
8 |
3577 |
39 |
29 |
210 |
|
Number of repeats |
dimeric |
|
9 |
699 |
215 |
117 |
3577 |
|
Comment |
|
|
10 |
168 |
93 |
1656 |
1920 |
|
Representative matrix |
yes |
|
11 |
330 |
2984 |
112 |
592 |
|
|
|
|
12 |
3577 |
146 |
121 |
387 |
|
Source: |
|
|
13 |
1619 |
335 |
374 |
1958 |
|
Jolma et al., Cell 152:327-339 (2013); PubMed 23332764 |
|
|
14 |
1587 |
617 |
677 |
696 |
|
|
|