|
|
POU1F1_1 |
|
|
|
|||
|
|
A |
C |
G |
T |
|
Name |
POU1F1 |
|
1 |
1338 |
2288 |
1533 |
1403 |
|
TF group |
POU |
|
2 |
1238 |
1119 |
1249 |
2634 |
|
Polypeptide used |
DBD |
|
3 |
1418 |
3720 |
1328 |
2451 |
|
Ligand sequence |
TACACC40NCAC |
|
4 |
4892 |
523 |
774 |
1230 |
|
Batch of SELEX experiment |
AI |
|
5 |
153 |
407 |
162 |
5898 |
|
Seed sequence |
NNYATGMATAATTAATN |
|
6 |
610 |
275 |
7763 |
398 |
|
Hamming distance of sequences to seed |
2 |
|
7 |
2975 |
3245 |
146 |
215 |
|
SELEX cycle |
3 |
|
8 |
5281 |
390 |
186 |
242 |
|
Number of repeats |
monomeric |
|
9 |
57 |
78 |
65 |
5912 |
|
Comment |
|
|
10 |
5140 |
352 |
556 |
867 |
|
Representative matrix |
no |
|
11 |
4613 |
955 |
650 |
2364 |
|
|
|
|
12 |
1199 |
849 |
1058 |
5358 |
|
|
|
|
13 |
924 |
1406 |
1036 |
5412 |
|
|
|
|
14 |
4915 |
1557 |
1102 |
1345 |
|
|
|
|
15 |
5179 |
628 |
885 |
795 |
|
Source: |
|
|
16 |
1218 |
1726 |
1416 |
5078 |
|
Jolma et al., Cell 152:327-339 (2013); PubMed 23332764 |
|
|
17 |
900 |
1176 |
2813 |
1801 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
POU1F1_2 |
|
|
|
|||
|
|
A |
C |
G |
T |
|
Name |
POU1F1 |
|
1 |
1211 |
247 |
273 |
397 |
|
TF group |
POU |
|
2 |
1128 |
123 |
187 |
1000 |
|
Polypeptide used |
DBD |
|
3 |
276 |
83 |
108 |
2128 |
|
Ligand sequence |
TACACC40NCAC |
|
4 |
2128 |
14 |
32 |
19 |
|
Batch of SELEX experiment |
AI |
|
5 |
45 |
74 |
26 |
2128 |
|
Seed sequence |
NWTATGCWAATKAG |
|
6 |
28 |
11 |
2128 |
176 |
|
Hamming distance of sequences to seed |
1 |
|
7 |
98 |
2128 |
164 |
536 |
|
SELEX cycle |
3 |
|
8 |
1267 |
12 |
7 |
861 |
|
Number of repeats |
monomeric |
|
9 |
2128 |
11 |
82 |
85 |
|
Comment |
|
|
10 |
2128 |
10 |
0 |
3 |
|
Representative
matrix |
yes |
|
11 |
76 |
37 |
40 |
2128 |
|
|
|
|
12 |
222 |
241 |
840 |
1287 |
|
Source: |
|
|
13 |
2128 |
174 |
194 |
273 |
|
Jolma et
al., Cell 152:327-339 (2013); PubMed 23332764 |
|
|
14 |
736 |
479 |
2128 |
547 |
|
|
|