|
|
PKNOX1 |
|
|
|
|||
|
|
A |
C |
G |
T |
|
Name |
PKNOX1 |
|
1 |
94 |
234 |
73 |
19207 |
|
TF group |
MEIS |
|
2 |
23 |
95 |
22060 |
13 |
|
Polypeptide used |
DBD |
|
3 |
17458 |
6 |
146 |
22 |
|
Ligand sequence |
TCGCAT20NGA |
|
4 |
11 |
18108 |
0 |
8 |
|
Batch of SELEX experiment |
Y |
|
5 |
17768 |
3 |
38 |
7 |
|
Seed sequence |
TGACAGSTGTCA |
|
6 |
22 |
7 |
21059 |
1185 |
|
Hamming distance of sequences to seed |
2 |
|
7 |
810 |
6611 |
7095 |
19 |
|
SELEX cycle |
3 |
|
8 |
5 |
35 |
16 |
19248 |
|
Number of repeats |
dimeric |
|
9 |
352 |
13 |
22141 |
6 |
|
Comment |
|
|
10 |
191 |
101 |
9 |
18745 |
|
Representative
matrix |
no |
|
11 |
19 |
17957 |
69 |
13 |
|
Source: |
|
|
12 |
17625 |
57 |
193 |
421 |
|
Jolma et al., Cell 152:327-339 (2013); PubMed 23332764 |
|