|
|
PAX6 |
|
|
|
|||
|
|
A |
C |
G |
T |
|
Name |
PAX6 |
|
1 |
289 |
166 |
354 |
887 |
|
TF group |
PAX |
|
2 |
134 |
102 |
77 |
1024 |
|
Polypeptide used |
DBD |
|
3 |
396 |
28 |
79 |
930 |
|
Ligand sequence |
TCCATA20NTAC |
|
4 |
40 |
927 |
21 |
327 |
|
Batch of SELEX experiment |
Y |
|
5 |
1044 |
206 |
45 |
16 |
|
Seed sequence |
TTTYACGCWTGANTGMNYN |
|
6 |
0 |
1411 |
2 |
122 |
|
Hamming distance of sequences to seed |
2 |
|
7 |
13 |
0 |
1363 |
1 |
|
SELEX cycle |
4 |
|
8 |
1 |
1410 |
99 |
0 |
|
Number of repeats |
monomeric |
|
9 |
617 |
65 |
3 |
447 |
|
Comment |
|
|
10 |
9 |
63 |
0 |
1101 |
|
Representative
matrix |
yes |
|
11 |
3 |
359 |
1334 |
7 |
|
|
|
|
12 |
1015 |
0 |
220 |
0 |
|
|
|
|
13 |
336 |
440 |
281 |
173 |
|
|
|
|
14 |
7 |
84 |
7 |
1054 |
|
|
|
|
15 |
168 |
2 |
1238 |
75 |
|
|
|
|
16 |
574 |
586 |
148 |
1 |
|
|
|
|
17 |
486 |
111 |
357 |
214 |
|
Source: |
|
|
18 |
26 |
829 |
8 |
438 |
|
Jolma et al., Cell 152:327-339 (2013); PubMed 23332764 |
|
|
19 |
457 |
217 |
66 |
374 |
|
|
|