|
|
PAX2 |
|
|
|
|||
|
|
A |
C |
G |
T |
|
Name |
PAX2 |
|
1 |
553 |
2602 |
1602 |
589 |
|
TF group |
PAX |
|
2 |
27 |
7 |
5776 |
248 |
|
Polypeptide used |
DBD |
|
3 |
423 |
177 |
19 |
4588 |
|
Ligand sequence |
TCCACG20NCAC |
|
4 |
25 |
5189 |
9 |
1071 |
|
Batch of SELEX experiment |
Y |
|
5 |
4992 |
380 |
67 |
44 |
|
Seed sequence |
NGTCACGCWTSRNTGNNY |
|
6 |
91 |
5049 |
23 |
732 |
|
Hamming distance of sequences to seed |
2 |
|
7 |
80 |
7 |
4936 |
7 |
|
SELEX cycle |
3 |
|
8 |
3 |
4860 |
1568 |
2 |
|
Number of repeats |
monomeric |
|
9 |
2069 |
275 |
157 |
2943 |
|
Comment |
|
|
10 |
39 |
1045 |
0 |
4339 |
|
Representative
matrix |
no |
|
11 |
15 |
2204 |
3302 |
173 |
|
|
|
|
12 |
3970 |
6 |
1340 |
1 |
|
|
|
|
13 |
734 |
1674 |
1620 |
1135 |
|
|
|
|
14 |
69 |
867 |
50 |
4436 |
|
|
|
|
15 |
1450 |
10 |
4900 |
112 |
|
|
|
|
16 |
2051 |
2167 |
984 |
7 |
|
Source: |
|
|
17 |
1193 |
1029 |
1288 |
1525 |
|
Jolma et al., Cell 152:327-339 (2013); PubMed 23332764 |
|
|
18 |
31 |
3254 |
103 |
2118 |
|
|
|