|
|
PAX1 |
|
|
|
|||
|
|
A |
C |
G |
T |
|
Name |
PAX1 |
|
1 |
314 |
3157 |
1423 |
327 |
|
TF group |
PAX |
|
2 |
3 |
0 |
5266 |
79 |
|
Polypeptide used |
DBD |
|
3 |
234 |
80 |
0 |
4396 |
|
Ligand sequence |
TAACTT20NTCA |
|
4 |
3 |
4490 |
1 |
475 |
|
Batch of SELEX experiment |
Y |
|
5 |
3574 |
213 |
2 |
0 |
|
Seed sequence |
SGTCACGCWTGANTGMA |
|
6 |
2 |
4489 |
0 |
651 |
|
Hamming distance of sequences to seed |
2 |
|
7 |
3 |
2 |
5304 |
3 |
|
SELEX cycle |
4 |
|
8 |
0 |
4404 |
1017 |
0 |
|
Number of repeats |
monomeric |
|
9 |
2215 |
81 |
43 |
1529 |
|
Comment |
|
|
10 |
11 |
425 |
2 |
4290 |
|
Representative
matrix |
yes |
|
11 |
1 |
1769 |
4652 |
54 |
|
|
|
|
12 |
3579 |
2 |
595 |
0 |
|
|
|
|
13 |
824 |
1629 |
1230 |
744 |
|
|
|
|
14 |
74 |
612 |
32 |
4185 |
|
|
|
|
15 |
849 |
11 |
4289 |
880 |
|
Source: |
|
|
16 |
1453 |
2561 |
1147 |
0 |
|
Jolma et al., Cell 152:327-339 (2013); PubMed 23332764 |
|
|
17 |
2643 |
2136 |
780 |
1290 |
|
|
|