|
|
NR3C1 |
|
|
|
|||
|
|
A |
C |
G |
T |
|
Name |
NR3C1 |
|
1 |
6520 |
2274 |
9169 |
4861 |
|
TF group |
nuclearreceptor |
|
2 |
8885 |
107 |
12768 |
225 |
|
Polypeptide used |
DBD |
|
3 |
40 |
7 |
27337 |
38 |
|
Ligand sequence |
TGACGA20NGCA |
|
4 |
8932 |
599 |
2854 |
10448 |
|
Batch of SELEX experiment |
AG |
|
5 |
18207 |
8 |
9 |
10 |
|
Seed sequence |
NRGWACANNNTGTWCYN |
|
6 |
0 |
24481 |
14 |
0 |
|
Hamming distance of sequences to seed |
2 |
|
7 |
18421 |
18 |
698 |
71 |
|
SELEX cycle |
4 |
|
8 |
2470 |
9569 |
1583 |
10711 |
|
Number of repeats |
dimeric |
|
9 |
7736 |
3656 |
5589 |
5972 |
|
Comment |
|
|
10 |
11413 |
964 |
7861 |
1822 |
|
Representative
matrix |
no |
|
11 |
81 |
565 |
50 |
23751 |
|
|
|
|
12 |
0 |
11 |
27160 |
5 |
|
|
|
|
13 |
8 |
9 |
50 |
24434 |
|
|
|
|
14 |
8832 |
3149 |
648 |
10375 |
|
|
|
|
15 |
33 |
24380 |
5 |
58 |
|
Source: |
|
|
16 |
234 |
14665 |
188 |
9821 |
|
Jolma et
al., Cell 152:327-339 (2013); PubMed 23332764 |
|
|
17 |
6219 |
8912 |
3101 |
5075 |
|
|
|