|
|
NFATC1_1 |
|
|
|
|||
|
|
A |
C |
G |
T |
|
Name |
NFATC1 |
|
1 |
2812 |
1026 |
1078 |
761 |
|
TF group |
NFAT |
|
2 |
5214 |
241 |
2519 |
251 |
|
Polypeptide used |
full |
|
3 |
91 |
1487 |
96 |
4914 |
|
Ligand sequence |
TTCGTA20NTGC |
|
4 |
9 |
0 |
6407 |
12 |
|
Batch of SELEX experiment |
AE |
|
5 |
52 |
2 |
7612 |
0 |
|
Seed sequence |
NATGGAAANWWWWTTTYCMN |
|
6 |
4611 |
3 |
21 |
1 |
|
Hamming distance of sequences to seed |
2 |
|
7 |
4610 |
0 |
10 |
6 |
|
SELEX cycle |
4 |
|
8 |
4664 |
281 |
1 |
224 |
|
Number of repeats |
dimeric |
|
9 |
2426 |
1713 |
1258 |
472 |
|
Comment |
|
|
10 |
2106 |
369 |
108 |
2871 |
|
Representative matrix |
yes |
|
11 |
2092 |
850 |
903 |
2529 |
|
|
|
|
12 |
3345 |
1048 |
411 |
1480 |
|
|
|
|
13 |
1591 |
908 |
719 |
2910 |
|
|
|
|
14 |
393 |
364 |
1135 |
4206 |
|
|
|
|
15 |
42 |
8 |
135 |
4619 |
|
|
|
|
16 |
0 |
3 |
0 |
4623 |
|
|
|
|
17 |
0 |
3137 |
10 |
2692 |
|
|
|
|
18 |
0 |
5385 |
4 |
75 |
|
Source: |
|
|
19 |
2330 |
3088 |
585 |
32 |
|
Jolma et al., Cell 152:327-339 (2013); PubMed 23332764 |
|
|
20 |
1835 |
331 |
1151 |
2236 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
NFATC1_2 |
|
|
|
|||
|
|
A |
C |
G |
T |
|
Name |
NFATC1 |
|
1 |
577 |
77 |
795 |
12535 |
|
TF group |
NFAT |
|
2 |
9 |
24 |
0 |
13590 |
|
Polypeptide used |
full |
|
3 |
3 |
1412 |
0 |
13786 |
|
Ligand sequence |
TTCGTA20NTGC |
|
4 |
0 |
14826 |
4 |
20 |
|
Batch of SELEX experiment |
AE |
|
5 |
61 |
14670 |
1310 |
230 |
|
Seed sequence |
TTTCCAYNRTGGAAA |
|
6 |
8746 |
167 |
3839 |
107 |
|
Hamming distance of sequences to seed |
2 |
|
7 |
755 |
5883 |
585 |
7416 |
|
SELEX cycle |
4 |
|
8 |
5052 |
699 |
1538 |
4597 |
|
Number of repeats |
dimeric |
|
9 |
6660 |
421 |
5336 |
617 |
|
Comment |
|
|
10 |
300 |
2376 |
263 |
12044 |
|
Representative matrix |
yes |
|
11 |
200 |
377 |
17064 |
85 |
|
|
|
|
12 |
63 |
39 |
17150 |
3 |
|
|
|
|
13 |
10372 |
10 |
911 |
14 |
|
Source: |
|
|
14 |
10067 |
11 |
9 |
0 |
|
Jolma et al., Cell 152:327-339 (2013); PubMed 23332764 |
|
|
15 |
9133 |
541 |
45 |
586 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
NFATC1_3 |
|
|
|
|||
|
|
A |
C |
G |
T |
|
Name |
NFATC1 |
|
1 |
1850 |
2139 |
3222 |
7516 |
|
TF group |
NFAT |
|
2 |
414 |
32 |
732 |
11631 |
|
Polypeptide used |
full |
|
3 |
0 |
0 |
1 |
11876 |
|
Ligand sequence |
TTCGTA20NTGC |
|
4 |
8 |
2234 |
19 |
11878 |
|
Batch of SELEX experiment |
AE |
|
5 |
4 |
13094 |
1 |
2 |
|
Seed sequence |
TTTTCCATGGAAAA |
|
6 |
1024 |
13149 |
736 |
138 |
|
Hamming distance of sequences to seed |
2 |
|
7 |
8508 |
2 |
157 |
6 |
|
SELEX cycle |
4 |
|
8 |
8 |
307 |
9 |
11196 |
|
Number of repeats |
dimeric |
|
9 |
100 |
804 |
15157 |
425 |
|
Comment |
|
|
10 |
0 |
0 |
15335 |
2 |
|
Representative matrix |
yes |
|
11 |
8812 |
11 |
1595 |
0 |
|
|
|
|
12 |
8805 |
11 |
9 |
10 |
|
Source: |
|
|
13 |
8596 |
201 |
53 |
343 |
|
Jolma et al., Cell 152:327-339 (2013); PubMed 23332764 |
|
|
14 |
6198 |
1745 |
2842 |
1725 |
|
|
|