NFATC1_1

 

 

 

 

A

C

G

T

 

Name

NFATC1

1

2812

1026

1078

761

 

TF group

NFAT

2

5214

241

2519

251

 

Polypeptide used

full

3

91

1487

96

4914

 

Ligand sequence

TTCGTA20NTGC

4

9

0

6407

12

 

Batch of SELEX experiment

AE

5

52

2

7612

0

 

Seed sequence

NATGGAAANWWWWTTTYCMN

6

4611

3

21

1

 

Hamming distance of sequences to seed

2

7

4610

0

10

6

 

SELEX cycle

4

8

4664

281

1

224

 

Number of repeats

dimeric

9

2426

1713

1258

472

 

Comment

 

10

2106

369

108

2871

 

Representative matrix

yes

11

2092

850

903

2529

 

 

 

12

3345

1048

411

1480

 

 

 

13

1591

908

719

2910

 

 

 

14

393

364

1135

4206

 

 

 

15

42

8

135

4619

 

 

 

16

0

3

0

4623

 

 

 

17

0

3137

10

2692

 

 

 

18

0

5385

4

75

 

Source:

 

19

2330

3088

585

32

 

Jolma et al., Cell 152:327-339 (2013); PubMed 23332764

20

1835

331

1151

2236

 

 

 

 

 

 

 

 

 

 

 

 

NFATC1_2

 

 

 

 

A

C

G

T

 

Name

NFATC1

1

577

77

795

12535

 

TF group

NFAT

2

9

24

0

13590

 

Polypeptide used

full

3

3

1412

0

13786

 

Ligand sequence

TTCGTA20NTGC

4

0

14826

4

20

 

Batch of SELEX experiment

AE

5

61

14670

1310

230

 

Seed sequence

TTTCCAYNRTGGAAA

6

8746

167

3839

107

 

Hamming distance of sequences to seed

2

7

755

5883

585

7416

 

SELEX cycle

4

8

5052

699

1538

4597

 

Number of repeats

dimeric

9

6660

421

5336

617

 

Comment

 

10

300

2376

263

12044

 

Representative matrix

yes

11

200

377

17064

85

 

 

 

12

63

39

17150

3

 

 

 

13

10372

10

911

14

 

Source:

 

14

10067

11

9

0

 

Jolma et al., Cell 152:327-339 (2013); PubMed 23332764

15

9133

541

45

586

 

 

 

 

 

 

 

 

 

 

 

 

NFATC1_3

 

 

 

 

A

C

G

T

 

Name

NFATC1

1

1850

2139

3222

7516

 

TF group

NFAT

2

414

32

732

11631

 

Polypeptide used

full

3

0

0

1

11876

 

Ligand sequence

TTCGTA20NTGC

4

8

2234

19

11878

 

Batch of SELEX experiment

AE

5

4

13094

1

2

 

Seed sequence

TTTTCCATGGAAAA

6

1024

13149

736

138

 

Hamming distance of sequences to seed

2

7

8508

2

157

6

 

SELEX cycle

4

8

8

307

9

11196

 

Number of repeats

dimeric

9

100

804

15157

425

 

Comment

 

10

0

0

15335

2

 

Representative matrix

yes

11

8812

11

1595

0

 

 

 

12

8805

11

9

10

 

Source:

 

13

8596

201

53

343

 

Jolma et al., Cell 152:327-339 (2013); PubMed 23332764

14

6198

1745

2842

1725