MYBL2_d1

 

 

 

 

A

C

G

T

 

Name

MYBL2

1

481

9

72

8

 

TF group

MYB

2

481

14

40

62

 

Polypeptide used

DBD

3

15

481

3

1

 

Ligand sequence

TGAGTG20NGA

4

17

481

573

83

 

Batch of SELEX experiment

AC

5

4

1

481

3

 

Seed sequence

AACCGTTAACGGNN

6

68

47

11

481

 

Hamming distance of sequences to seed

1

7

0

13

0

481

 

SELEX cycle

3

8

481

0

15

2

 

Number of repeats

dimeric

9

481

72

42

38

 

Comment

 

10

0

481

3

15

 

Representative matrix

no

11

82

449

481

136

 

 

 

12

65

72

481

131

 

Source:

 

13

116

126

16

223

 

Jolma et al., Cell 152:327-339 (2013); PubMed 23332764

14

43

164

8

266

 

 

 

 

 

 

 

 

 

 

 

 

MYBL2_d2

 

 

 

 

A

C

G

T

 

Name

MYBL2

1

1746

64

907

291

 

TF group

MYB

2

135

1750

52

4

 

Polypeptide used

DBD

3

223

1713

354

26

 

Ligand sequence

TGAGTG20NGA

4

36

9

3302

3

 

Batch of SELEX experiment

AC

5

6

10

127

2627

 

Seed sequence

ACCGTTARRACCGTTA

6

6

7

5

2622

 

Hamming distance of sequences to seed

2

7

2069

20

330

92

 

SELEX cycle

3

8

1194

451

945

179

 

Number of repeats

dimeric

9

1664

8

639

34

 

Comment

 

10

2039

78

281

184

 

Representative matrix

yes

11

145

1843

56

34

 

 

 

12

157

1837

224

85

 

 

 

13

85

3

3232

1

 

 

 

14

3

27

226

2605

 

Source:

 

15

12

29

3

2629

 

Jolma et al., Cell 152:327-339 (2013); PubMed 23332764

16

2036

86

338

187

 

 

 

 

 

 

 

 

 

 

 

 

MYBL2_m1

 

 

 

 

A

C

G

T

 

Name

MYBL2

1

6649

2694

2932

5054

 

TF group

MYB

2

5775

3262

2294

5997

 

Polypeptide used

DBD

3

17329

248

7613

692

 

Ligand sequence

TGAGTG20NGA

4

17329

527

4589

2060

 

Batch of SELEX experiment

AC

5

841

17329

517

167

 

Seed sequence

NNAACCGTTNN

6

601

17329

0

468

 

Hamming distance of sequences to seed

1

7

1

9

17329

0

 

SELEX cycle

3

8

411

967

197

17329

 

Number of repeats

monomeric

9

175

1479

39

17329

 

Comment

 

10

11455

663

2131

3080

 

Representative matrix

no

11

6970

4272

2517

3569

 

 

 

 

 

 

 

 

 

Source:

 

 

 

 

 

 

 

Jolma et al., Cell 152:327-339 (2013); PubMed 23332764

 

 

 

 

 

 

 

 

 

MYBL2_d3

 

 

 

 

A

C

G

T

 

Name

MYBL2

1

785

34

447

41

 

TF group

MYB

2

1232

122

722

464

 

Polypeptide used

DBD

3

87

1232

85

39

 

Ligand sequence

TGAGTG20NGA

4

107

1232

190

30

 

Batch of SELEX experiment

AC

5

5

0

1232

1

 

Seed sequence

RACCGTTAAACNGYY

6

9

6

24

1232

 

Hamming distance of sequences to seed

1

7

0

9

0

1232

 

SELEX cycle

3

8

1232

74

77

561

 

Number of repeats

dimeric

9

1232

31

16

4

 

Comment

 

10

1232

38

28

79

 

Representative matrix

no

11

14

1232

6

4

 

 

 

12

57

418

467

289

 

 

 

13

82

123

1232

95

 

Source:

 

14

228

466

95

766

 

Jolma et al., Cell 152:327-339 (2013); PubMed 23332764

15

40

655

18

577