|
|
MTF1 |
|
|
|
|||
|
|
A |
C |
G |
T |
|
Name |
MTF1 |
|
1 |
1 |
0 |
4 |
50 |
|
TF group |
C2H2 |
|
2 |
3 |
5 |
10 |
40 |
|
Polypeptide used |
DBD |
|
3 |
1 |
1 |
0 |
53 |
|
Ligand sequence |
TGATCC20NCTA |
|
4 |
2 |
1 |
66 |
0 |
|
Batch of SELEX experiment |
Y |
|
5 |
1 |
71 |
0 |
0 |
|
Seed sequence |
TTTGCACACGNCAC |
|
6 |
53 |
0 |
1 |
1 |
|
Hamming distance of sequences to seed |
2 |
|
7 |
2 |
69 |
2 |
0 |
|
SELEX cycle |
4 |
|
8 |
52 |
3 |
1 |
1 |
|
Number of repeats |
monomeric |
|
9 |
0 |
67 |
0 |
0 |
|
Comment |
< 100 counts |
|
10 |
1 |
0 |
70 |
1 |
|
Representative matrix |
yes |
|
11 |
9 |
2 |
42 |
10 |
|
|
|
|
12 |
0 |
63 |
0 |
8 |
|
|
|
|
13 |
46 |
10 |
7 |
2 |
|
Source: |
|
|
14 |
2 |
62 |
1 |
3 |
|
Jolma et al., Cell 152:327-339 (2013); PubMed 23332764 |
|