IRF5_d1

 

 

 

 

A

C

G

T

 

Name

IRF5

1

35

169

22

42

 

TF group

IRF

2

10

177

17

38

 

Polypeptide used

full

3

15

3

357

21

 

Ligand sequence

TAACAA20NCG

4

223

2

6

7

 

Batch of SELEX experiment

AD

5

224

5

4

44

 

Seed sequence

CCGAAACCGAAACY

6

225

0

5

1

 

Hamming distance of sequences to seed

2

7

1

180

0

4

 

SELEX cycle

3

8

0

182

0

37

 

Number of repeats

dimeric

9

105

30

365

8

 

Comment

 

10

224

11

7

1

 

Representative matrix

no

11

206

6

25

40

 

 

 

12

223

84

12

15

 

Source:

 

13

29

171

25

22

 

Jolma et al., Cell 152:327-339 (2013); PubMed 23332764

14

22

80

23

157

 

 

 

 

 

 

 

 

 

 

 

 

IRF5_m1

 

 

 

 

A

C

G

T

 

Name

IRF5

1

819

439

147

440

 

TF group

IRF

2

1844

177

158

115

 

Polypeptide used

full

3

388

1844

181

351

 

Ligand sequence

TAACAA20NCG

4

59

1844

1

34

 

Batch of SELEX experiment

AD

5

9

11

1844

0

 

Seed sequence

NACCGAAACYN

6

1844

0

4

0

 

Hamming distance of sequences to seed

1

7

1844

0

7

219

 

SELEX cycle

3

8

1844

28

0

0

 

Number of repeats

monomeric

9

38

1844

93

13

 

Comment

 

10

106

973

45

871

 

Representative matrix

yes

11

982

398

266

198

 

Source:

 

 

 

 

 

 

 

Jolma et al., Cell 152:327-339 (2013); PubMed 23332764