|
|
Hoxd3 |
|
|
|
|||
|
|
A |
C |
G |
T |
|
Name |
Hoxd3 |
|
1 |
439 |
283 |
410 |
241 |
|
TF group |
homeodomain |
|
2 |
245 |
408 |
479 |
241 |
|
Polypeptide used |
DBD |
|
3 |
82 |
505 |
16 |
868 |
|
Ligand sequence |
TGCCAT20NCG |
|
4 |
1373 |
457 |
186 |
168 |
|
Batch of SELEX experiment |
P |
|
5 |
1373 |
117 |
77 |
162 |
|
Seed sequence |
NNYAATTANN |
|
6 |
30 |
0 |
67 |
1373 |
|
Hamming distance of sequences to seed |
1 |
|
7 |
80 |
79 |
367 |
1373 |
|
SELEX cycle |
4 |
|
8 |
1373 |
28 |
20 |
109 |
|
Number of repeats |
monomeric |
|
9 |
453 |
290 |
427 |
204 |
|
Comment |
|
|
10 |
250 |
433 |
368 |
322 |
|
Representative
matrix |
no |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Source: |
|
|
|
|
|
|
|
|
Jolma et
al., Cell 152:327-339 (2013); PubMed 23332764 |
|