|
|
HOXA1 |
|
|
|
|||
|
|
A |
C |
G |
T |
|
Name |
HOXA1 |
|
1 |
1778 |
1117 |
1853 |
1006 |
|
TF group |
homeodomain |
|
2 |
837 |
1746 |
1792 |
1381 |
|
Polypeptide used |
DBD |
|
3 |
53 |
1972 |
0 |
3783 |
|
Ligand sequence |
TGGAAT20NAAT |
|
4 |
5755 |
672 |
1292 |
64 |
|
Batch of SELEX experiment |
AF |
|
5 |
5755 |
172 |
0 |
77 |
|
Seed sequence |
NNYAATTANN |
|
6 |
0 |
0 |
0 |
5755 |
|
Hamming distance of sequences to seed |
1 |
|
7 |
44 |
972 |
888 |
5755 |
|
SELEX cycle |
3 |
|
8 |
5755 |
0 |
33 |
139 |
|
Number of repeats |
monomeric |
|
9 |
1897 |
1359 |
1762 |
736 |
|
Comment |
|
|
10 |
1272 |
2051 |
1458 |
973 |
|
Representative
matrix |
no |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Source: |
|
|
|
|
|
|
|
|
Jolma et
al., Cell 152:327-339 (2013); PubMed 23332764 |
|