|
|
HOMEZ |
|
|
|
|||
|
|
A |
C |
G |
T |
|
Name |
HOMEZ |
|
1 |
914 |
172 |
189 |
216 |
|
TF group |
HOMEZ |
|
2 |
1492 |
28 |
73 |
226 |
|
Polypeptide used |
DBD |
|
3 |
1492 |
18 |
55 |
176 |
|
Ligand sequence |
TCGATC20NTAT |
|
4 |
1492 |
71 |
4 |
190 |
|
Batch of SELEX experiment |
Y |
|
5 |
39 |
1492 |
8 |
0 |
|
Seed sequence |
NAAACGATNNAN |
|
6 |
23 |
28 |
1492 |
63 |
|
Hamming distance of sequences to seed |
1 |
|
7 |
1492 |
0 |
9 |
9 |
|
SELEX cycle |
4 |
|
8 |
297 |
22 |
101 |
1492 |
|
Number of repeats |
monomer or dimer |
|
9 |
177 |
105 |
168 |
1041 |
|
Comment |
|
|
10 |
1009 |
41 |
57 |
384 |
|
Representative matrix |
yes |
|
11 |
1492 |
357 |
197 |
2166 |
|
Source: |
|
|
12 |
850 |
211 |
74 |
357 |
|
Jolma et al., Cell 152:327-339 (2013); PubMed 23332764 |
|