|
|
HNF1A |
|
|
|
|||
|
|
A |
C |
G |
T |
|
Name |
HNF1A |
|
1 |
5209 |
2441 |
3490 |
3009 |
|
TF group |
homeodomain |
|
2 |
6981 |
415 |
7168 |
636 |
|
Polypeptide used |
full |
|
3 |
376 |
1060 |
903 |
14149 |
|
Ligand sequence |
TGAGCA20NCGA |
|
4 |
2914 |
2170 |
544 |
14149 |
|
Batch of SELEX experiment |
W |
|
5 |
14149 |
3 |
246 |
14 |
|
Seed sequence |
NRTTAATNATTAACN |
|
6 |
14149 |
633 |
8 |
364 |
|
Hamming distance of sequences to seed |
1 |
|
7 |
1274 |
423 |
7 |
14149 |
|
SELEX cycle |
2 |
|
8 |
3340 |
3750 |
4540 |
2518 |
|
Number of repeats |
dimeric |
|
9 |
14149 |
9 |
339 |
651 |
|
Comment |
|
|
10 |
711 |
13 |
845 |
14149 |
|
Representative matrix |
yes |
|
11 |
42 |
228 |
4 |
14149 |
|
|
|
|
12 |
14149 |
237 |
1337 |
1638 |
|
|
|
|
13 |
14149 |
695 |
1095 |
174 |
|
Source: |
|
|
14 |
1488 |
14149 |
655 |
914 |
|
Jolma et al., Cell 152:327-339 (2013); PubMed 23332764 |
|
|
15 |
3972 |
3427 |
2275 |
4475 |
|
|
|