|
|
HMX3 |
|
|
|
|||
|
|
A |
C |
G |
T |
|
Name |
HMX3 |
|
1 |
3371 |
1077 |
1905 |
1202 |
|
TF group |
homeodomain |
|
2 |
1646 |
2132 |
2538 |
1240 |
|
Polypeptide used |
DBD |
|
3 |
465 |
7556 |
161 |
712 |
|
Ligand sequence |
TGCACT30NCAC |
|
4 |
7556 |
284 |
2083 |
372 |
|
Batch of SELEX experiment |
AI |
|
5 |
4819 |
2737 |
232 |
445 |
|
Seed sequence |
NNCAMTTAANN |
|
6 |
0 |
129 |
0 |
7556 |
|
Hamming distance of sequences to seed |
1 |
|
7 |
1047 |
1221 |
0 |
7556 |
|
SELEX cycle |
3 |
|
8 |
7556 |
343 |
1035 |
1375 |
|
Number of repeats |
monomeric |
|
9 |
7556 |
1830 |
2532 |
2219 |
|
Comment |
|
|
10 |
2197 |
2685 |
1311 |
1363 |
|
Representative
matrix |
no |
|
11 |
2485 |
1777 |
2321 |
974 |
|
|
|
|
|
|
|
|
|
|
Source: |
|
|
|
|
|
|
|
|
Jolma et
al., Cell 152:327-339 (2013); PubMed 23332764 |
|