|
|
HMBOX1 |
|
|
|
|||
|
|
A |
C |
G |
T |
|
Name |
HMBOX1 |
|
1 |
487 |
449 |
194 |
101 |
|
TF group |
homeodomain |
|
2 |
122 |
683 |
186 |
547 |
|
Polypeptide used |
DBD |
|
3 |
75 |
25 |
63 |
1231 |
|
Ligand sequence |
TCCTGG20NCG |
|
4 |
1231 |
0 |
367 |
44 |
|
Batch of SELEX experiment |
Z |
|
5 |
2 |
51 |
1231 |
5 |
|
Seed sequence |
NYTAGTTAMN |
|
6 |
26 |
1 |
5 |
1231 |
|
Hamming distance of sequences to seed |
1 |
|
7 |
237 |
50 |
8 |
1231 |
|
SELEX cycle |
4 |
|
8 |
1231 |
4 |
17 |
102 |
|
Number of repeats |
monomeric |
|
9 |
753 |
478 |
130 |
140 |
|
Comment |
|
|
10 |
202 |
542 |
370 |
117 |
|
Representative
matrix |
yes |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Source: |
|
|
|
|
|
|
|
|
Jolma et
al., Cell 152:327-339 (2013); PubMed 23332764 |
|