|
HLF_1 |
|
|
|
|||
|
A |
C |
G |
T |
|
Name |
HLF |
1 |
429 |
735 |
379 |
595 |
|
TF group |
bZIP |
2 |
1149 |
712 |
989 |
118 |
|
Polypeptide used |
full |
3 |
7 |
1 |
0 |
2138 |
|
Ligand sequence |
TAGCCT20NCG |
4 |
6 |
38 |
248 |
2138 |
|
Batch of SELEX experiment |
AD |
5 |
2138 |
0 |
310 |
21 |
|
Seed sequence |
NRTTACGTAAYN |
6 |
15 |
2138 |
35 |
790 |
|
Hamming distance of sequences to seed |
1 |
7 |
1758 |
95 |
2138 |
11 |
|
SELEX cycle |
3 |
8 |
53 |
680 |
8 |
2138 |
|
Number of repeats |
dimeric |
9 |
2138 |
282 |
4 |
6 |
|
Comment |
|
10 |
2138 |
0 |
5 |
7 |
|
Representative matrix |
no |
11 |
127 |
1239 |
280 |
899 |
|
Source: |
|
12 |
644 |
737 |
360 |
397 |
|
Jolma et al., Cell 152:327-339 (2013); PubMed 23332764 |
|
|
|
|
|
|
|
|
|
|
Hlf_2 |
|
|
|
|||
|
A |
C |
G |
T |
|
Name |
Hlf |
1 |
69 |
128 |
174 |
172 |
|
TF group |
bZIP |
2 |
300 |
35 |
242 |
10 |
|
Polypeptide used |
DBD |
3 |
7 |
1 |
16 |
542 |
|
Ligand sequence |
TCAATT20NTA |
4 |
9 |
0 |
1 |
542 |
|
Batch of SELEX experiment |
P |
5 |
542 |
5 |
0 |
2 |
|
Seed sequence |
NRTTACGTAAYN |
6 |
0 |
542 |
0 |
31 |
|
Hamming distance of sequences to seed |
1 |
7 |
76 |
0 |
542 |
0 |
|
SELEX cycle |
3 |
8 |
5 |
11 |
0 |
542 |
|
Number of repeats |
dimeric |
9 |
542 |
0 |
0 |
47 |
|
Comment |
|
10 |
542 |
2 |
1 |
5 |
|
Representative
matrix |
no |
11 |
4 |
310 |
11 |
231 |
|
Source: |
|
12 |
209 |
211 |
57 |
65 |
|
Jolma et
al., Cell 152:327-339 (2013); PubMed 23332764 |