|
|
GSX1 |
|
|
|
|||
|
|
A |
C |
G |
T |
|
Name |
GSX1 |
|
1 |
331 |
391 |
209 |
252 |
|
TF group |
homeodomain |
|
2 |
164 |
535 |
258 |
226 |
|
Polypeptide used |
DBD |
|
3 |
124 |
450 |
48 |
733 |
|
Ligand sequence |
TCACAC20NCG |
|
4 |
781 |
402 |
60 |
177 |
|
Batch of SELEX experiment |
Y |
|
5 |
1183 |
106 |
123 |
50 |
|
Seed sequence |
NNYMATTANN |
|
6 |
90 |
79 |
3 |
1183 |
|
Hamming distance of sequences to seed |
1 |
|
7 |
106 |
106 |
0 |
1183 |
|
SELEX cycle |
4 |
|
8 |
1183 |
0 |
9 |
103 |
|
Number of repeats |
monomeric |
|
9 |
448 |
249 |
313 |
173 |
|
Comment |
|
|
10 |
350 |
305 |
214 |
315 |
|
Representative
matrix |
no |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Source: |
|
|
|
|
|
|
|
|
Jolma et
al., Cell 152:327-339 (2013); PubMed 23332764 |
|