|
|
GLI2_1 |
|
|
|
|||
|
|
A |
C |
G |
T |
|
Name |
GLI2 |
|
1 |
493 |
514 |
8874 |
1138 |
|
TF group |
C2H2 |
|
2 |
8874 |
2471 |
1540 |
16 |
|
Polypeptide used |
DBD |
|
3 |
366 |
8874 |
16 |
79 |
|
Ligand sequence |
TAAGTA40NTGA |
|
4 |
20 |
8874 |
25 |
26 |
|
Batch of SELEX experiment |
AI |
|
5 |
8874 |
1040 |
642 |
1034 |
|
Seed sequence |
GACCACMCACNNNG |
|
6 |
27 |
8874 |
17 |
2 |
|
Hamming distance of sequences to seed |
1 |
|
7 |
2879 |
5995 |
41 |
13 |
|
SELEX cycle |
3 |
|
8 |
951 |
8874 |
177 |
1193 |
|
Number of repeats |
monomeric |
|
9 |
8874 |
201 |
1575 |
267 |
|
Comment |
|
|
10 |
3084 |
8874 |
2189 |
2103 |
|
Representative matrix |
yes |
|
11 |
2751 |
1627 |
3679 |
818 |
|
|
|
|
12 |
3073 |
1286 |
2058 |
2457 |
|
Source: |
|
|
13 |
2434 |
3219 |
1040 |
2181 |
|
Jolma et al., Cell 152:327-339 (2013); PubMed 23332764 |
|
|
14 |
1913 |
3195 |
8874 |
2154 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
GLI2_2 |
|
|
|
|||
|
|
A |
C |
G |
T |
|
Name |
GLI2 |
|
1 |
348 |
184 |
1437 |
203 |
|
TF group |
C2H2 |
|
2 |
128 |
1437 |
116 |
83 |
|
Polypeptide used |
DBD |
|
3 |
16 |
10 |
1437 |
36 |
|
Ligand sequence |
TAAGTA40NTGA |
|
4 |
1437 |
148 |
29 |
15 |
|
Batch of SELEX experiment |
AI |
|
5 |
6 |
1437 |
6 |
8 |
|
Seed sequence |
GCGACCACNCTG |
|
6 |
0 |
1437 |
8 |
4 |
|
Hamming distance of sequences to seed |
1 |
|
7 |
1437 |
21 |
6 |
14 |
|
SELEX cycle |
3 |
|
8 |
5 |
1437 |
9 |
5 |
|
Number of repeats |
monomeric |
|
9 |
709 |
386 |
233 |
109 |
|
Comment |
|
|
10 |
314 |
1437 |
92 |
137 |
|
Representative
matrix |
yes |
|
11 |
671 |
117 |
215 |
1437 |
|
Source: |
|
|
12 |
843 |
221 |
1437 |
308 |
|
Jolma et al., Cell 152:327-339 (2013); PubMed 23332764 |
|