FOXO4_d1

 

 

 

 

A

C

G

T

 

Name

FOXO4

1

312

8

1486

0

 

TF group

forkhead

2

167

22

44

1246

 

Polypeptide used

DBD

3

738

428

4

1

 

Ligand sequence

TGACTC20NGA

4

971

4

0

1

 

Batch of SELEX experiment

AC

5

974

0

2

0

 

Seed sequence

GTAAACATGTTTAC

6

0

829

0

32

 

Hamming distance of sequences to seed

2

7

975

0

4

40

 

SELEX cycle

3

8

30

4

2

1254

 

Number of repeats

dimeric

9

40

0

1707

0

 

Comment

 

10

3

2

2

1272

 

Representative matrix

no

11

2

8

17

1275

 

 

 

12

10

0

425

1142

 

Source:

 

13

950

15

28

37

 

Jolma et al., Cell 152:327-339 (2013); PubMed 23332764

14

1

837

6

132

 

 

 

 

 

 

 

 

 

 

 

 

FOXO4_m1

 

 

 

 

A

C

G

T

 

Name

FOXO4

1

1669

13

5378

0

 

TF group

forkhead

2

345

69

123

5378

 

Polypeptide used

DBD

3

5378

1259

32

20

 

Ligand sequence

TGACTC20NGA

4

5378

146

19

20

 

Batch of SELEX experiment

AC

5

5378

0

90

10

 

Seed sequence

GTAAACA

6

58

5378

33

958

 

Hamming distance of sequences to seed

1

7

5378

10

10

40

 

SELEX cycle

3

 

 

 

 

 

 

Number of repeats

monomeric

 

 

 

 

 

 

Comment

 

 

 

 

 

 

 

Representative matrix

no

 

 

 

 

 

 

 

 

 

 

 

 

 

 

Source:

 

 

 

 

 

 

 

Jolma et al., Cell 152:327-339 (2013); PubMed 23332764

 

 

 

 

 

 

 

 

 

FOXO4_1

 

 

 

 

A

C

G

T

 

Name

FOXO4

1

158

64

93

416

 

TF group

forkhead

2

117

39

43

471

 

Polypeptide used

DBD

3

20

40

56

503

 

Ligand sequence

TGACTC20NGA

4

29

309

12

11

 

Batch of SELEX experiment

AC

5

22

311

7

12

 

Seed sequence

TTTCCCCACACG

6

4

311

6

3

 

Hamming distance of sequences to seed

2

7

0

312

13

15

 

SELEX cycle

3

8

381

11

9

0

 

Number of repeats

putatively multimeric

9

0

311

3

15

 

Comment

 

10

381

13

28

15

 

Representative matrix

no

11

66

291

24

42

 

Source:

 

12

144

112

527

64

 

Jolma et al., Cell 152:327-339 (2013); PubMed 23332764