FOXO3_d1

 

 

 

 

A

C

G

T

 

Name

FOXO3

1

116

0

1178

0

 

TF group

forkhead

2

11

5

4

1092

 

Polypeptide used

full

3

680

78

0

2

 

Ligand sequence

TGTTGC20NGTG

4

739

1

0

0

 

Batch of SELEX experiment

W

5

751

3

0

0

 

Seed sequence

GTAAACATGTTTAC

6

0

801

0

3

 

Hamming distance of sequences to seed

2

7

759

0

0

6

 

SELEX cycle

4

8

2

0

0

1079

 

Number of repeats

dimeric

9

3

0

1238

0

 

Comment

 

10

0

0

0

1156

 

Representative matrix

no

11

0

0

0

1079

 

 

 

12

3

1

168

988

 

Source:

 

13

736

0

2

7

 

Jolma et al., Cell 152:327-339 (2013); PubMed 23332764

14

1

768

0

64

 

 

 

 

 

 

 

 

 

 

 

 

FOXO3_m1

 

 

 

 

A

C

G

T

 

Name

FOXO3

1

21

0

532

0

 

TF group

forkhead

2

0

0

13

532

 

Polypeptide used

full

3

532

16

5

1

 

Ligand sequence

TGTTGC20NGTG

4

532

1

0

0

 

Batch of SELEX experiment

W

5

532

10

0

0

 

Seed sequence

GTAAACAW

6

15

532

0

3

 

Hamming distance of sequences to seed

1

7

532

11

0

0

 

SELEX cycle

4

8

317

12

36

215

 

Number of repeats

monomeric

 

 

 

 

 

 

Comment

 

 

 

 

 

 

 

Representative matrix

no

 

 

 

 

 

 

 

 

 

 

 

 

 

 

Source:

 

 

 

 

 

 

 

Jolma et al., Cell 152:327-339 (2013); PubMed 23332764

 

 

 

 

 

 

 

 

 

FOXO3_1

 

 

 

 

A

C

G

T

 

Name

FOXO3

1

12

24

36

137

 

TF group

forkhead

2

9

15

11

180

 

Polypeptide used

full

3

0

0

0

198

 

Ligand sequence

TGTTGC20NGTG

4

9

113

5

3

 

Batch of SELEX experiment

W

5

0

111

3

1

 

Seed sequence

TTTCCCCACAC

6

0

111

4

9

 

Hamming distance of sequences to seed

2

7

0

109

3

0

 

SELEX cycle

4

8

96

0

1

0

 

Number of repeats

putatively multimeric

9

3

112

0

0

 

Comment

 

10

95

17

1

7

 

Representative matrix

no

11

14

99

10

9

 

 

 

 

 

 

 

 

 

Source:

 

 

 

 

 

 

 

Jolma et al., Cell 152:327-339 (2013); PubMed 23332764