FOXO1_m1

 

 

 

 

A

C

G

T

 

Name

FOXO1

1

551

51

1281

22

 

TF group

forkhead

2

155

35

26

1281

 

Polypeptide used

DBD

3

1281

196

13

4

 

Ligand sequence

TTCAGC20NTA

4

1281

120

2

4

 

Batch of SELEX experiment

AF

5

1281

0

34

0

 

Seed sequence

GTAAACAA

6

0

1281

11

96

 

Hamming distance of sequences to seed

1

7

1281

16

2

9

 

SELEX cycle

3

8

1281

271

201

772

 

Number of repeats

monomeric

 

 

 

 

 

 

Comment

 

 

 

 

 

 

 

Representative matrix

no

 

 

 

 

 

 

 

 

 

 

 

 

 

 

Source:

 

 

 

 

 

 

 

Jolma et al., Cell 152:327-339 (2013); PubMed 23332764

 

 

 

 

 

 

 

 

 

FOXO1_d1

 

 

 

 

A

C

G

T

 

Name

FOXO1

1

155

11

338

1

 

TF group

forkhead

2

44

5

3

404

 

Polypeptide used

DBD

3

283

56

0

0

 

Ligand sequence

TTCAGC20NTA

4

303

8

0

1

 

Batch of SELEX experiment

AF

5

312

1

0

1

 

Seed sequence

GTAAACATGTTTAC

6

0

269

1

16

 

Hamming distance of sequences to seed

2

7

311

1

2

4

 

SELEX cycle

3

8

3

1

0

428

 

Number of repeats

dimeric

9

18

0

535

1

 

Comment

 

10

0

0

0

426

 

Representative matrix

yes

11

1

1

7

426

 

 

 

12

0

0

61

416

 

Source:

 

13

310

5

12

12

 

Jolma et al., Cell 152:327-339 (2013); PubMed 23332764

14

2

279

0

35

 

 

 

 

 

 

 

 

 

 

 

 

FOXO1_1

 

 

 

 

A

C

G

T

 

Name

FOXO1

1

112

101

138

685

 

TF group

forkhead

2

117

38

36

742

 

Polypeptide used

DBD

3

30

62

40

763

 

Ligand sequence

TTCAGC20NTA

4

8

482

6

20

 

Batch of SELEX experiment

AF

5

11

484

3

11

 

Seed sequence

TTTCCCCACACG

6

0

486

3

4

 

Hamming distance of sequences to seed

2

7

8

487

6

9

 

SELEX cycle

3

8

557

8

6

9

 

Number of repeats

putatively multimeric

9

2

491

0

1

 

Comment

 

10

554

24

5

0

 

Representative matrix

yes

11

48

479

42

51

 

Source:

 

12

237

140

646

156

 

Jolma et al., Cell 152:327-339 (2013); PubMed 23332764