FOXJ3_m1
	A	C	G	T	Name	FOXJ3
1	521	0	628	0	TF group	forkhead
2	211	80	189	1149	Polypeptide used	DBD
3	1149	45	39	29	Ligand sequence	TAGTGG20NGTT
4	1149	12	27	58	Batch of SELEX experiment	AC
5	1149	0	59	68	Seed sequence	RTAAACAA
6	488	1149	300	147	Hamming distance of sequences to seed	1
7	1149	0	7	0	SELEX cycle	4
8	1149	148	123	208	Number of repeats	monomeric
					Comment
					Representative matrix	no
					Source:
					Jolma et al., Cell 152:327-339 (2013); PubMed 23332764
	FOXJ3_d1
	A	C	G	T	Name	FOXJ3
1	84	4	467	0	TF group	forkhead
2	27	7	1	581	Polypeptide used	DBD
3	376	35	7	25	Ligand sequence	TAGTGG20NGTT
4	396	5	5	2	Batch of SELEX experiment	AC
5	398	0	0	17	Seed sequence	RTAAACARTAAACA
6	15	518	9	60	Hamming distance of sequences to seed	2
7	395	8	0	5	SELEX cycle	4
8	292	0	164	0	Number of repeats	dimeric
9	23	0	0	579	Comment
10	335	107	19	9	Representative matrix	no
11	393	16	1	0
12	399	12	0	9	Source:
13	10	544	0	8	Jolma et al., Cell 152:327-339 (2013); PubMed 23332764
14	404	9	0	5
	FOXJ3_d2
	A	C	G	T	Name	FOXJ3
1	130	1	454	1	TF group	forkhead
2	26	56	20	598	Polypeptide used	DBD
3	411	2	3	25	Ligand sequence	TAGTGG20NGTT
4	416	0	9	30	Batch of SELEX experiment	AC
5	418	12	0	6	Seed sequence	RTAAACATAAACA
6	5	519	8	117	Hamming distance of sequences to seed	2
7	413	0	0	11	SELEX cycle	4
8	118	21	21	563	Number of repeats	dimeric
9	385	96	10	17	Comment
10	413	39	9	1	Representative matrix	no
11	413	3	33	0
12	7	570	19	25	Source:
13	417	0	14	0	Jolma et al., Cell 152:327-339 (2013); PubMed 23332764
	Foxj3_1
	A	C	G	T	Name	Foxj3
1	782	29	156	33	TF group	forkhead
2	88	782	9	29	Polypeptide used	DBD
3	18	1	782	0	Ligand sequence	TAAACA20NCAA
4	1	0	782	29	Batch of SELEX experiment	AF
5	782	0	2	10	Seed sequence	ACGGACACAAT
6	2	782	4	0	Hamming distance of sequences to seed	1
7	782	0	0	2	SELEX cycle	4
8	0	782	0	0	Number of repeats	putatively multimeric
9	782	0	0	14	Comment
10	782	1	0	32	Representative matrix	no
11	20	3	11	782
					Source:
					Jolma et al., Cell 152:327-339 (2013); PubMed 23332764
	Foxj3_d3
	A	C	G	T	Name	Foxj3
1	1048	505	4066	121	TF group	forkhead
2	567	585	243	5649	Polypeptide used	DBD
3	3504	505	138	181	Ligand sequence	TAAACA20NCAA
4	3581	167	94	99	Batch of SELEX experiment	AF
5	3556	65	104	56	Seed sequence	RTAAACAATAAACA
6	175	5079	179	422	Hamming distance of sequences to seed	2
7	3541	79	112	40	SELEX cycle	4
8	2933	87	2155	99	Number of repeats	dimeric
9	1175	560	187	5423	Comment
10	3240	1524	396	323	Representative matrix	no
11	3550	294	125	105
12	3620	382	134	278	Source:
13	480	5098	195	432	Jolma et al., Cell 152:327-339 (2013); PubMed 23332764
14	3659	21	145	156
	Foxj3_m2
	A	C	G	T	Name	Foxj3
1	2778	124	3487	23	TF group	forkhead
2	429	708	200	6265	Polypeptide used	DBD
3	6265	674	52	5	Ligand sequence	TAAACA20NCAA
4	6265	317	31	34	Batch of SELEX experiment	AF
5	6265	42	23	52	Seed sequence	RTAAACAA
6	0	6265	1	638	Hamming distance of sequences to seed	1
7	6265	32	38	0	SELEX cycle	3
8	6265	1195	1124	1784	Number of repeats	monomeric
					Comment
					Representative matrix	no
					Source:
					Jolma et al., Cell 152:327-339 (2013); PubMed 23332764
	Foxj3_d4
	A	C	G	T	Name	Foxj3
1	655	44	1383	18	TF group	forkhead
2	287	346	52	2039	Polypeptide used	DBD
3	2039	119	27	18	Ligand sequence	TAAACA20NCAA
4	2039	34	10	8	Batch of SELEX experiment	AF
5	2039	0	29	5	Seed sequence	RTAAACATMAACA
6	32	2039	6	251	Hamming distance of sequences to seed	1
7	2039	0	180	0	SELEX cycle	4
8	1752	127	53	2039	Number of repeats	dimeric
9	1868	171	8	10	Comment
10	2039	42	7	34	Representative matrix	no
11	2039	13	33	8
12	145	2039	4	257	Source:
13	2039	0	30	17	Jolma et al., Cell 152:327-339 (2013); PubMed 23332764