|
|
ESR1 |
|
|
|
|||
|
|
A |
C |
G |
T |
|
Name |
ESR1 |
|
1 |
232 |
65 |
101 |
88 |
|
TF group |
nuclearreceptor |
|
2 |
402 |
6 |
206 |
0 |
|
Polypeptide used |
DBD |
|
3 |
0 |
0 |
623 |
34 |
|
Ligand sequence |
TAGAGT20NCG |
|
4 |
2 |
0 |
638 |
0 |
|
Batch of SELEX experiment |
W |
|
5 |
0 |
0 |
3 |
549 |
|
Seed sequence |
NAGGTCAMSRTGACCTN |
|
6 |
1 |
452 |
0 |
2 |
|
Hamming distance of sequences to seed |
2 |
|
7 |
471 |
0 |
30 |
0 |
|
SELEX cycle |
4 |
|
8 |
108 |
338 |
53 |
23 |
|
Number of repeats |
dimeric |
|
9 |
127 |
223 |
340 |
65 |
|
Comment |
|
|
10 |
235 |
88 |
284 |
13 |
|
Representative matrix |
yes |
|
11 |
0 |
23 |
1 |
510 |
|
|
|
|
12 |
2 |
0 |
632 |
0 |
|
|
|
|
13 |
491 |
1 |
1 |
0 |
|
|
|
|
14 |
0 |
460 |
2 |
0 |
|
|
|
|
15 |
15 |
455 |
0 |
0 |
|
Source: |
|
|
16 |
0 |
143 |
7 |
502 |
|
Jolma et al., Cell 152:327-339 (2013); PubMed 23332764 |
|
|
17 |
35 |
68 |
209 |
204 |
|
|
|