EN2_1

 

 

 

 

A

C

G

T

 

Name

EN2

1

189

173

97

204

 

TF group

homeodomain

2

95

243

137

189

 

Polypeptide used

DBD

3

0

334

0

329

 

Ligand sequence

TTGAGG20NGA

4

663

10

60

18

 

Batch of SELEX experiment

R

5

663

0

0

0

 

Seed sequence

NNYAATTANN

6

0

3

0

663

 

Hamming distance of sequences to seed

1

7

0

90

19

663

 

SELEX cycle

3

8

663

0

11

62

 

Number of repeats

monomeric

9

231

154

142

136

 

Comment

 

10

130

259

139

136

 

Representative matrix

no

 

 

 

 

 

 

 

 

 

 

 

 

 

 

Source:

 

 

 

 

 

 

 

Jolma et al., Cell 152:327-339 (2013); PubMed 23332764

 

 

 

 

 

 

 

 

 

EN2_2

 

 

 

 

A

C

G

T

 

Name

EN2

1

402

564

456

225

 

TF group

homeodomain

2

212

681

412

343

 

Polypeptide used

full

3

10

1024

35

624

 

Ligand sequence

TGCCAT20NGA

4

1648

297

164

53

 

Batch of SELEX experiment

AE

5

1648

105

7

0

 

Seed sequence

NNYAATTANN

6

0

0

0

1648

 

Hamming distance of sequences to seed

1

7

0

420

203

1648

 

SELEX cycle

3

8

1648

0

45

0

 

Number of repeats

monomeric

9

350

491

630

177

 

Comment

 

10

181

708

476

283

 

Representative matrix

no

 

 

 

 

 

 

 

 

 

 

 

 

 

 

Source:

 

 

 

 

 

 

 

Jolma et al., Cell 152:327-339 (2013); PubMed 23332764

 

 

 

 

 

 

 

 

 

En2_3

 

 

 

 

A

C

G

T

 

Name

En2

1

66

98

112

54

 

TF group

homeodomain

2

32

152

115

32

 

Polypeptide used

DBD

3

0

66

0

264

 

Ligand sequence

TCAGCT20NCG

4

330

74

19

0

 

Batch of SELEX experiment

Z

5

330

0

10

0

 

Seed sequence

NNYAATTANN

6

4

0

0

330

 

Hamming distance of sequences to seed

1

7

0

16

35

330

 

SELEX cycle

4

8

330

0

0

0

 

Number of repeats

monomeric

9

78

65

148

40

 

Comment

 

10

28

123

89

90

 

Representative matrix

no

 

 

 

 

 

 

 

 

 

 

 

 

 

 

Source:

 

 

 

 

 

 

 

Jolma et al., Cell 152:327-339 (2013); PubMed 23332764