ELK3_1

 

 

 

 

A

C

G

T

 

Name

ELK3

1

2237

294

713

456

 

TF group

ETS

2

269

2237

223

77

 

Polypeptide used

DBD

3

120

2237

14

8

 

Ligand sequence

TCGGGG20NGGT

4

1

0

2237

0

 

Batch of SELEX experiment

AG

5

2

4

2237

78

 

Seed sequence

ACCGGAAGTN

6

2237

7

3

1

 

Hamming distance of sequences to seed

1

7

2237

43

0

353

 

SELEX cycle

2

8

498

245

2237

58

 

Number of repeats

monomeric

9

151

487

168

2237

 

Comment

 

10

778

318

649

492

 

Representative matrix

no

 

 

 

 

 

 

Source:

 

 

 

 

 

 

 

Jolma et al., Cell 152:327-339 (2013); PubMed 23332764

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

Elk3_2

 

 

 

 

A

C

G

T

 

Name

Elk3

1

12884

610

2295

1184

 

TF group

ETS

2

566

12884

425

219

 

Polypeptide used

DBD

3

229

12884

21

2

 

Ligand sequence

TGAGTG20NTGA

4

0

11

12884

0

 

Batch of SELEX experiment

AC

5

0

0

12884

106

 

Seed sequence

ACCGGAAGTN

6

12884

13

0

14

 

Hamming distance of sequences to seed

1

7

12884

91

23

947

 

SELEX cycle

3

8

1744

508

12884

72

 

Number of repeats

monomeric

9

504

1672

422

12884

 

Comment

 

10

4577

1432

4127

2748

 

Representative matrix

no

 

 

 

 

 

 

Source:

 

 

 

 

 

 

 

Jolma et al., Cell 152:327-339 (2013); PubMed 23332764