|
|
ELF3_1 |
|
|
|
|||
|
|
A |
C |
G |
T |
|
Name |
ELF3 |
|
1 |
2574 |
700 |
671 |
1958 |
|
TF group |
ETS |
|
2 |
4382 |
19 |
40 |
385 |
|
Polypeptide used |
DBD |
|
3 |
347 |
5633 |
592 |
227 |
|
Ligand sequence |
TCCGTG20NTGC |
|
4 |
380 |
5717 |
560 |
5 |
|
Batch of SELEX experiment |
Y |
|
5 |
651 |
5660 |
26 |
1 |
|
Seed sequence |
WACCCGGAAGTA |
|
6 |
0 |
2 |
6125 |
0 |
|
Hamming distance of sequences to seed |
2 |
|
7 |
0 |
5 |
6131 |
2 |
|
SELEX cycle |
3 |
|
8 |
4575 |
2 |
5 |
1 |
|
Number of repeats |
monomeric |
|
9 |
4613 |
0 |
0 |
44 |
|
Comment |
|
|
10 |
681 |
48 |
5802 |
0 |
|
Representative matrix |
no |
|
11 |
85 |
253 |
45 |
6011 |
|
Source: |
|
|
12 |
3650 |
292 |
1674 |
657 |
|
Jolma et al., Cell 152:327-339 (2013); PubMed 23332764 |
|
|
|
|
|
|
|
|
|
|
|
|
ELF3_2 |
|
|
|
|||
|
|
A |
C |
G |
T |
|
Name |
ELF3 |
|
1 |
632 |
163 |
144 |
420 |
|
TF group |
ETS |
|
2 |
1131 |
11 |
4 |
83 |
|
Polypeptide used |
full |
|
3 |
71 |
1366 |
279 |
31 |
|
Ligand sequence |
TGACCT20NCCA |
|
4 |
153 |
1389 |
157 |
0 |
|
Batch of SELEX experiment |
AG |
|
5 |
129 |
1417 |
3 |
0 |
|
Seed
sequence |
NACCCGGAAGTAN |
|
6 |
3 |
0 |
2121 |
0 |
|
Hamming distance of sequences to seed |
2 |
|
7 |
0 |
6 |
2132 |
7 |
|
SELEX cycle |
4 |
|
8 |
1194 |
1 |
1 |
0 |
|
Number of repeats |
monomeric |
|
9 |
1201 |
1 |
0 |
14 |
|
Comment |
|
|
10 |
134 |
0 |
2092 |
11 |
|
Representative
matrix |
no |
|
11 |
24 |
38 |
11 |
1571 |
|
|
|
|
12 |
923 |
62 |
426 |
179 |
|
Source: |
|
|
13 |
675 |
152 |
358 |
201 |
|
Jolma et al., Cell 152:327-339 (2013); PubMed 23332764 |
|