|
|
ELF1_1 |
|
|
|
|||
|
|
A |
C |
G |
T |
|
Name |
ELF1 |
|
1 |
3447 |
515 |
880 |
1042 |
|
TF group |
ETS |
|
2 |
3447 |
342 |
160 |
566 |
|
Polypeptide used |
DBD |
|
3 |
625 |
3447 |
301 |
314 |
|
Ligand sequence |
TGGGTA20NGA |
|
4 |
98 |
3447 |
257 |
0 |
|
Batch of SELEX experiment |
O |
|
5 |
116 |
3447 |
0 |
0 |
|
Seed sequence |
AACCCGGAAGTN |
|
6 |
0 |
0 |
3447 |
0 |
|
Hamming distance of sequences to seed |
1 |
|
7 |
0 |
0 |
3447 |
0 |
|
SELEX cycle |
7 |
|
8 |
3447 |
0 |
6 |
0 |
|
Number of repeats |
monomeric |
|
9 |
3447 |
1 |
0 |
59 |
|
Comment |
|
|
10 |
539 |
0 |
3447 |
1 |
|
Representative matrix |
no |
|
11 |
34 |
299 |
0 |
3447 |
|
Source: |
|
|
12 |
1042 |
656 |
1354 |
394 |
|
Jolma et al., Cell 152:327-339 (2013); PubMed 23332764 |
|
|
|
|
|
|
|
|
|
|
|
|
ELF1_2 |
|
|
|
|||
|
|
A |
C |
G |
T |
|
Name |
ELF1 |
|
1 |
95 |
5 |
1 |
30 |
|
TF group |
ETS |
|
2 |
113 |
6 |
4 |
6 |
|
Polypeptide used |
full |
|
3 |
16 |
97 |
0 |
16 |
|
Ligand sequence |
TATGGG20NCG |
|
4 |
5 |
115 |
11 |
0 |
|
Batch of SELEX experiment |
W |
|
5 |
0 |
117 |
6 |
2 |
|
Seed sequence |
AACCCGGAAGTR |
|
6 |
1 |
0 |
174 |
0 |
|
Hamming distance of sequences to seed |
2 |
|
7 |
0 |
0 |
173 |
5 |
|
SELEX cycle |
4 |
|
8 |
117 |
0 |
0 |
1 |
|
Number of repeats |
monomeric |
|
9 |
119 |
0 |
1 |
7 |
|
Comment |
|
|
10 |
10 |
0 |
167 |
0 |
|
Representative
matrix |
no |
|
11 |
3 |
5 |
8 |
139 |
|
Source: |
|
|
12 |
48 |
11 |
81 |
5 |
|
Jolma et al., Cell 152:327-339 (2013); PubMed 23332764 |
|