|
|
DRGX |
|
|
|
|||
|
|
A |
C |
G |
T |
|
Name |
DRGX |
|
1 |
1976 |
2347 |
1377 |
1959 |
|
TF group |
homeodomain |
|
2 |
1363 |
625 |
95 |
7658 |
|
Polypeptide used |
DBD |
|
3 |
7658 |
80 |
485 |
504 |
|
Ligand sequence |
TCCCTC20NCG |
|
4 |
7658 |
11 |
16 |
8 |
|
Batch of SELEX experiment |
Y |
|
5 |
310 |
1587 |
134 |
6072 |
|
Seed sequence |
NTAAYYNAATTAN |
|
6 |
297 |
4049 |
703 |
3610 |
|
Hamming distance of sequences to seed |
1 |
|
7 |
1654 |
1828 |
1142 |
3034 |
|
SELEX cycle |
2 |
|
8 |
7658 |
1097 |
569 |
444 |
|
Number of repeats |
dimeric |
|
9 |
7658 |
231 |
102 |
136 |
|
Comment |
|
|
10 |
2 |
11 |
5 |
7658 |
|
Representative
matrix |
no |
|
11 |
824 |
687 |
65 |
7658 |
|
|
|
|
12 |
7658 |
101 |
337 |
785 |
|
Source: |
|
|
13 |
2359 |
1817 |
1768 |
1713 |
|
Jolma et
al., Cell 152:327-339 (2013); PubMed 23332764 |
|