DLX1_1

 

 

 

 

A

C

G

T

 

Name

DLX1

1

2123

2825

1814

1519

 

TF group

homeodomain

2

2584

2795

1592

1311

 

Polypeptide used

DBD

3

2295

2753

149

5528

 

Ligand sequence

TCTTGA20NGA

4

8281

861

416

347

 

Batch of SELEX experiment

AC

5

8281

105

42

535

 

Seed sequence

NNYAATTANN

6

1002

41

49

8281

 

Hamming distance of sequences to seed

1

7

157

359

511

8281

 

SELEX cycle

4

8

8281

103

36

1910

 

Number of repeats

monomeric

9

1774

1894

2077

2536

 

Comment

 

10

1613

3126

1893

1648

 

Representative matrix

no

 

 

 

 

 

 

 

 

 

 

 

 

 

 

Source:

 

 

 

 

 

 

 

Jolma et al., Cell 152:327-339 (2013); PubMed 23332764

 

 

 

 

 

 

 

 

 

Dlx1_2

 

 

 

 

A

C

G

T

 

Name

Dlx1

1

2349

2754

2631

1663

 

TF group

homeodomain

2

550

5131

113

4266

 

Polypeptide used

DBD

3

9397

788

533

665

 

Ligand sequence

TGAGAT20NCG

4

9397

522

105

236

 

Batch of SELEX experiment

P

5

1

49

24

9397

 

Seed sequence

NYAATTAN

6

285

725

278

9397

 

Hamming distance of sequences to seed

1

7

9397

144

79

702

 

SELEX cycle

2

8

2499

2830

1758

2311

 

Number of repeats

monomeric

 

 

 

 

 

 

Comment

 

 

 

 

 

 

 

Representative matrix

yes

 

 

 

 

 

 

 

 

 

 

 

 

 

 

Source:

 

 

 

 

 

 

 

Jolma et al., Cell 152:327-339 (2013); PubMed 23332764